| Chain sequence(s) |
A: MSHHHHHHSGMLSLEEIKERFLELYRRLYIDDMAELVKNNDYAEIYAELYHIGFNIKHWLVINPETGEVDYKESLKRMIILWLPRLGIEINMEALEKLFSTPEAQKLVEEFKKNVEEFLKKWEEFHDKFFELGGDSELPVYEGGKSPVEVVMEPFQKIMAILTNMILEYVKVMYPEEKEKVEVKPEDFAIPKNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:18)
[INFO] Main: Simulation completed successfully. (00:06:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5474 | |
| 2 | S | A | -0.6281 | |
| 3 | H | A | -1.7471 | |
| 4 | H | A | -2.3482 | |
| 5 | H | A | -2.7567 | |
| 6 | H | A | -2.7805 | |
| 7 | H | A | -2.7517 | |
| 8 | H | A | -2.0670 | |
| 9 | S | A | -1.3191 | |
| 10 | G | A | -0.8788 | |
| 11 | M | A | -0.6810 | |
| 12 | L | A | -0.6834 | |
| 13 | S | A | -1.4659 | |
| 14 | L | A | 0.0000 | |
| 15 | E | A | -3.6003 | |
| 16 | E | A | -2.8644 | |
| 17 | I | A | 0.0000 | |
| 18 | K | A | -2.9681 | |
| 19 | E | A | -3.7690 | |
| 20 | R | A | -3.2849 | |
| 21 | F | A | 0.0000 | |
| 22 | L | A | -2.1868 | |
| 23 | E | A | -3.0684 | |
| 24 | L | A | -1.7320 | |
| 25 | Y | A | 0.0000 | |
| 26 | R | A | -2.5347 | |
| 27 | R | A | -2.7743 | |
| 28 | L | A | -0.6450 | |
| 29 | Y | A | 0.0000 | |
| 30 | I | A | 0.0000 | |
| 31 | D | A | -3.5818 | |
| 32 | D | A | -3.5765 | |
| 33 | M | A | 0.0000 | |
| 34 | A | A | -3.1038 | |
| 35 | E | A | -3.9742 | |
| 36 | L | A | -3.1282 | |
| 37 | V | A | -2.7041 | |
| 38 | K | A | -3.7055 | |
| 39 | N | A | -3.2905 | |
| 40 | N | A | -3.3062 | |
| 41 | D | A | -3.0441 | |
| 42 | Y | A | -2.0499 | |
| 43 | A | A | -1.8979 | |
| 44 | E | A | -2.3925 | |
| 45 | I | A | 0.0000 | |
| 46 | Y | A | -0.6243 | |
| 47 | A | A | -0.7110 | |
| 48 | E | A | -1.0333 | |
| 49 | L | A | 0.0000 | |
| 50 | Y | A | -0.3587 | |
| 51 | H | A | -0.8069 | |
| 52 | I | A | 0.0000 | |
| 53 | G | A | 0.0000 | |
| 54 | F | A | -0.3234 | |
| 55 | N | A | -0.9314 | |
| 56 | I | A | 0.0000 | |
| 57 | K | A | -1.1207 | |
| 58 | H | A | -1.3222 | |
| 59 | W | A | 0.0000 | |
| 60 | L | A | -0.6120 | |
| 61 | V | A | -0.3314 | |
| 62 | I | A | 0.1532 | |
| 63 | N | A | -1.3744 | |
| 64 | P | A | -1.4510 | |
| 65 | E | A | -2.3403 | |
| 66 | T | A | -1.8141 | |
| 67 | G | A | -1.6898 | |
| 68 | E | A | -2.0515 | |
| 69 | V | A | -0.8777 | |
| 70 | D | A | -1.4480 | |
| 71 | Y | A | -1.6444 | |
| 72 | K | A | -1.9325 | |
| 73 | E | A | -1.7406 | |
| 74 | S | A | 0.0000 | |
| 75 | L | A | 0.0000 | |
| 76 | K | A | -1.2929 | |
| 77 | R | A | -0.9803 | |
| 78 | M | A | 0.0000 | |
| 79 | I | A | 0.0000 | |
| 80 | I | A | 0.1943 | |
| 81 | L | A | 0.3171 | |
| 82 | W | A | 0.0000 | |
| 83 | L | A | 0.0000 | |
| 84 | P | A | -0.8210 | |
| 85 | R | A | -0.8881 | |
| 86 | L | A | 0.0000 | |
| 87 | G | A | -1.0701 | |
| 88 | I | A | 0.0000 | |
| 89 | E | A | -1.6287 | |
| 90 | I | A | -0.4620 | |
| 91 | N | A | -1.1178 | |
| 92 | M | A | -1.3411 | |
| 93 | E | A | -2.6812 | |
| 94 | A | A | 0.0000 | |
| 95 | L | A | 0.0000 | |
| 96 | E | A | -3.3060 | |
| 97 | K | A | -2.9998 | |
| 98 | L | A | 0.0000 | |
| 99 | F | A | 0.0000 | |
| 100 | S | A | -1.7643 | |
| 101 | T | A | -1.8495 | |
| 102 | P | A | -1.8328 | |
| 103 | E | A | -2.8462 | |
| 104 | A | A | 0.0000 | |
| 105 | Q | A | -2.7325 | |
| 106 | K | A | -3.3418 | |
| 107 | L | A | -2.3863 | |
| 108 | V | A | 0.0000 | |
| 109 | E | A | -3.2129 | |
| 110 | E | A | -2.8875 | |
| 111 | F | A | 0.0000 | |
| 112 | K | A | -3.1678 | |
| 113 | K | A | -3.6684 | |
| 114 | N | A | -3.0800 | |
| 115 | V | A | 0.0000 | |
| 116 | E | A | -3.3417 | |
| 117 | E | A | -3.5434 | |
| 118 | F | A | 0.0000 | |
| 119 | L | A | -2.2625 | |
| 120 | K | A | -3.4952 | |
| 121 | K | A | -2.8721 | |
| 122 | W | A | 0.0000 | |
| 123 | E | A | -3.4120 | |
| 124 | E | A | -3.2673 | |
| 125 | F | A | 0.0000 | |
| 126 | H | A | -2.2073 | |
| 127 | D | A | -2.8736 | |
| 128 | K | A | -1.9524 | |
| 129 | F | A | 0.0000 | |
| 130 | F | A | -0.1073 | |
| 131 | E | A | -1.4385 | |
| 132 | L | A | -0.7448 | |
| 133 | G | A | -0.8350 | |
| 134 | G | A | -1.0642 | |
| 135 | D | A | -2.3257 | |
| 136 | S | A | -1.5933 | |
| 137 | E | A | -1.5178 | |
| 138 | L | A | -0.3836 | |
| 139 | P | A | 0.0000 | |
| 140 | V | A | 0.8842 | |
| 141 | Y | A | -0.4906 | |
| 142 | E | A | -1.9530 | |
| 143 | G | A | -1.5942 | |
| 144 | G | A | -1.3738 | |
| 145 | K | A | -1.6038 | |
| 146 | S | A | -0.6990 | |
| 147 | P | A | 0.0000 | |
| 148 | V | A | 0.0000 | |
| 149 | E | A | -1.6819 | |
| 150 | V | A | 0.0000 | |
| 151 | V | A | 0.0000 | |
| 152 | M | A | 0.0000 | |
| 153 | E | A | -1.9924 | |
| 154 | P | A | 0.0000 | |
| 155 | F | A | 0.0000 | |
| 156 | Q | A | -1.5858 | |
| 157 | K | A | -1.9506 | |
| 158 | I | A | 0.0000 | |
| 159 | M | A | 0.0000 | |
| 160 | A | A | 0.0000 | |
| 161 | I | A | 0.0000 | |
| 162 | L | A | 0.0000 | |
| 163 | T | A | 0.0000 | |
| 164 | N | A | -1.3130 | |
| 165 | M | A | 0.0000 | |
| 166 | I | A | 0.0000 | |
| 167 | L | A | 0.0000 | |
| 168 | E | A | -2.2286 | |
| 169 | Y | A | 0.0000 | |
| 170 | V | A | 0.0000 | |
| 171 | K | A | -1.7127 | |
| 172 | V | A | -0.8527 | |
| 173 | M | A | -0.7870 | |
| 174 | Y | A | -0.7856 | |
| 175 | P | A | -1.5952 | |
| 176 | E | A | -2.8752 | |
| 177 | E | A | -3.1015 | |
| 178 | K | A | -3.9449 | |
| 179 | E | A | -4.2979 | |
| 180 | K | A | -3.7474 | |
| 181 | V | A | -3.0620 | |
| 182 | E | A | -3.1696 | |
| 183 | V | A | 0.0000 | |
| 184 | K | A | -2.7613 | |
| 185 | P | A | -2.2352 | |
| 186 | E | A | -2.7326 | |
| 187 | D | A | -1.6982 | |
| 188 | F | A | 0.0000 | |
| 189 | A | A | -1.6294 | |
| 190 | I | A | -1.3970 | |
| 191 | P | A | -2.0968 | |
| 192 | K | A | -2.7276 | |
| 193 | N | A | -2.7788 | |
| 194 | S | A | -1.3684 |