| Chain sequence(s) |
A: IKLQQSGAELARPGASVKMSCKTSGYTFTRYTMHWVKQRPGQGLEWIGYINPSRGYTNYNQKFKDKATLTTDKSSSTAYMQLSSLTSEDSAVYYCARYYDDHYCLDYWGQGTTLTVSSVEGGSGGSGGSGGSGGVDDIQLTQSPAIMSASPGEKVTMTCRASSSVSYMNWYQQKSGTSPKRWIYDTSKVASGVPYRFSGSGSGTSYSLTISSMEAEDAATYYCQQWSSNPLTFGAGTKLELK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:00)
[INFO] Main: Simulation completed successfully. (00:00:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 3 | I | A | 1.0588 | |
| 4 | K | A | -1.2911 | |
| 5 | L | A | 0.0000 | |
| 6 | Q | A | -2.0680 | |
| 7 | Q | A | 0.0000 | |
| 8 | S | A | -1.1344 | |
| 9 | G | A | -0.8998 | |
| 10 | A | A | -0.2635 | |
| 11 | E | A | -0.4980 | |
| 12 | L | A | 0.6914 | |
| 13 | A | A | -0.4186 | |
| 14 | R | A | -1.7258 | |
| 15 | P | A | -1.6229 | |
| 16 | G | A | -1.2102 | |
| 17 | A | A | -1.0059 | |
| 18 | S | A | -1.2273 | |
| 19 | V | A | 0.0000 | |
| 20 | K | A | -2.1335 | |
| 21 | M | A | 0.0000 | |
| 22 | S | A | -1.0406 | |
| 23 | C | A | 0.0000 | |
| 24 | K | A | -2.2218 | |
| 25 | T | A | 0.0000 | |
| 26 | S | A | -0.8018 | |
| 27 | G | A | -0.0238 | |
| 28 | Y | A | -0.1175 | |
| 29 | T | A | -0.8049 | |
| 30 | F | A | 0.0000 | |
| 31 | T | A | -1.7716 | |
| 32 | R | A | -1.5733 | |
| 33 | Y | A | -0.3434 | |
| 34 | T | A | -0.0322 | |
| 35 | M | A | 0.0000 | |
| 36 | H | A | 0.0000 | |
| 37 | W | A | 0.0000 | |
| 38 | V | A | 0.0000 | |
| 39 | K | A | 0.0000 | |
| 40 | Q | A | -0.7193 | |
| 41 | R | A | -1.1468 | |
| 42 | P | A | -0.9894 | |
| 43 | G | A | -1.2928 | |
| 44 | Q | A | -1.7395 | |
| 45 | G | A | -0.9724 | |
| 46 | L | A | 0.0000 | |
| 47 | E | A | -0.8127 | |
| 48 | W | A | 0.0000 | |
| 49 | I | A | 0.0000 | |
| 50 | G | A | 0.0000 | |
| 51 | Y | A | 0.1847 | |
| 52 | I | A | 0.0000 | |
| 53 | N | A | -0.8960 | |
| 54 | P | A | 0.0000 | |
| 55 | S | A | -1.8407 | |
| 56 | R | A | -1.8882 | |
| 57 | G | A | -1.1739 | |
| 58 | Y | A | 0.3119 | |
| 59 | T | A | 0.1722 | |
| 60 | N | A | -0.2243 | |
| 61 | Y | A | -1.0058 | |
| 62 | N | A | 0.0000 | |
| 63 | Q | A | -2.3949 | |
| 64 | K | A | -2.7398 | |
| 65 | F | A | 0.0000 | |
| 66 | K | A | -3.3509 | |
| 67 | D | A | -3.0780 | |
| 68 | K | A | -2.2904 | |
| 69 | A | A | 0.0000 | |
| 70 | T | A | -1.1648 | |
| 71 | L | A | 0.0000 | |
| 72 | T | A | -0.3190 | |
| 73 | T | A | -1.1315 | |
| 74 | D | A | -1.7099 | |
| 75 | K | A | -2.2168 | |
| 76 | S | A | -1.2711 | |
| 77 | S | A | -1.1741 | |
| 78 | S | A | -1.4524 | |
| 79 | T | A | 0.0000 | |
| 80 | A | A | 0.0000 | |
| 81 | Y | A | -0.6807 | |
| 82 | M | A | 0.0000 | |
| 83 | Q | A | -1.5271 | |
| 84 | L | A | 0.0000 | |
| 85 | S | A | -1.1810 | |
| 86 | S | A | -1.0241 | |
| 87 | L | A | 0.0000 | |
| 88 | T | A | -1.2044 | |
| 89 | S | A | -1.1991 | |
| 90 | E | A | -1.0877 | |
| 91 | D | A | 0.0000 | |
| 92 | S | A | -0.3478 | |
| 93 | A | A | 0.0000 | |
| 94 | V | A | 0.0977 | |
| 95 | Y | A | 0.0000 | |
| 96 | Y | A | 0.0000 | |
| 97 | C | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | R | A | 0.0000 | |
| 100 | Y | A | 0.0000 | |
| 101 | Y | A | 0.1007 | |
| 102 | D | A | -0.9941 | |
| 103 | D | A | -2.0247 | |
| 104 | H | A | -1.3069 | |
| 105 | Y | A | -0.1167 | |
| 106 | C | A | 0.0000 | |
| 107 | L | A | 0.0000 | |
| 108 | D | A | 0.1065 | |
| 109 | Y | A | 0.2123 | |
| 110 | W | A | -0.5287 | |
| 111 | G | A | 0.0000 | |
| 112 | Q | A | -1.4372 | |
| 113 | G | A | -0.6861 | |
| 114 | T | A | 0.0000 | |
| 115 | T | A | -0.1204 | |
| 116 | L | A | 0.0000 | |
| 117 | T | A | -0.1319 | |
| 118 | V | A | 0.0000 | |
| 119 | S | A | -0.4243 | |
| 120 | S | A | -0.9104 | |
| 121 | V | A | 0.1941 | |
| 122 | E | A | -1.5729 | |
| 123 | G | A | -1.3601 | |
| 124 | G | A | -1.2306 | |
| 125 | S | A | -0.9656 | |
| 126 | G | A | -1.1839 | |
| 127 | G | A | -1.1825 | |
| 128 | S | A | -1.0410 | |
| 129 | G | A | -1.0375 | |
| 130 | G | A | -1.2240 | |
| 131 | S | A | -1.5030 | |
| 132 | G | A | -1.3106 | |
| 133 | G | A | -1.2711 | |
| 134 | S | A | 0.0000 | |
| 135 | G | A | -1.3887 | |
| 136 | G | A | -0.6752 | |
| 137 | V | A | -0.2110 | |
| 138 | D | A | -1.6451 | |
| 139 | D | A | 0.0000 | |
| 140 | I | A | -0.8537 | |
| 141 | Q | A | -1.5146 | |
| 142 | L | A | 0.0000 | |
| 143 | T | A | -0.8569 | |
| 144 | Q | A | 0.0000 | |
| 145 | S | A | -0.2179 | |
| 146 | P | A | 0.3151 | |
| 147 | A | A | 0.6523 | |
| 148 | I | A | 1.4408 | |
| 149 | M | A | 0.5121 | |
| 150 | S | A | -0.3706 | |
| 151 | A | A | 0.0000 | |
| 152 | S | A | -1.2958 | |
| 153 | P | A | -1.5350 | |
| 154 | G | A | -1.6866 | |
| 155 | E | A | -2.0701 | |
| 156 | K | A | -2.4488 | |
| 157 | V | A | 0.0000 | |
| 158 | T | A | -0.4913 | |
| 159 | M | A | 0.0000 | |
| 160 | T | A | -0.5304 | |
| 161 | C | A | 0.0000 | |
| 162 | R | A | -1.8174 | |
| 163 | A | A | 0.0000 | |
| 164 | S | A | -1.1728 | |
| 165 | S | A | -0.9326 | |
| 166 | S | A | -0.5433 | |
| 167 | V | A | 0.0000 | |
| 168 | S | A | -0.0422 | |
| 169 | Y | A | 0.1024 | |
| 170 | M | A | 0.0000 | |
| 171 | N | A | 0.0000 | |
| 172 | W | A | 0.0000 | |
| 173 | Y | A | 0.0000 | |
| 174 | Q | A | 0.0000 | |
| 175 | Q | A | -0.9544 | |
| 176 | K | A | -1.3102 | |
| 177 | S | A | -0.7714 | |
| 178 | G | A | -0.8938 | |
| 179 | T | A | -0.9199 | |
| 180 | S | A | -0.7373 | |
| 181 | P | A | 0.0000 | |
| 182 | K | A | -1.0163 | |
| 183 | R | A | -0.5153 | |
| 184 | W | A | 0.0000 | |
| 185 | I | A | 0.0000 | |
| 186 | Y | A | -0.2920 | |
| 187 | D | A | -0.7788 | |
| 188 | T | A | -0.4681 | |
| 189 | S | A | -0.8012 | |
| 190 | K | A | -1.1262 | |
| 191 | V | A | 0.0265 | |
| 192 | A | A | 0.0000 | |
| 193 | S | A | -0.4864 | |
| 194 | G | A | -0.3813 | |
| 195 | V | A | 0.0000 | |
| 196 | P | A | 0.4236 | |
| 197 | Y | A | 1.1706 | |
| 198 | R | A | 0.0116 | |
| 199 | F | A | 0.0000 | |
| 200 | S | A | -0.1530 | |
| 201 | G | A | 0.0000 | |
| 202 | S | A | -0.7307 | |
| 203 | G | A | -0.6814 | |
| 204 | S | A | -0.6187 | |
| 205 | G | A | -0.5957 | |
| 206 | T | A | -0.8789 | |
| 207 | S | A | -0.9533 | |
| 208 | Y | A | 0.0000 | |
| 209 | S | A | -0.5190 | |
| 210 | L | A | 0.0000 | |
| 211 | T | A | -0.5434 | |
| 212 | I | A | 0.0000 | |
| 213 | S | A | -1.1255 | |
| 214 | S | A | -1.4516 | |
| 215 | M | A | 0.0000 | |
| 216 | E | A | -1.8983 | |
| 217 | A | A | -1.1016 | |
| 218 | E | A | -1.6604 | |
| 219 | D | A | 0.0000 | |
| 220 | A | A | -0.8972 | |
| 221 | A | A | 0.0000 | |
| 222 | T | A | -0.5448 | |
| 223 | Y | A | 0.0000 | |
| 224 | Y | A | 0.0000 | |
| 225 | C | A | 0.0000 | |
| 226 | Q | A | 0.0000 | |
| 227 | Q | A | 0.0000 | |
| 228 | W | A | -0.4683 | |
| 229 | S | A | -0.4794 | |
| 230 | S | A | -0.5610 | |
| 231 | N | A | -0.8329 | |
| 232 | P | A | 0.0000 | |
| 233 | L | A | 0.0000 | |
| 234 | T | A | -0.3508 | |
| 235 | F | A | -0.0714 | |
| 236 | G | A | 0.0000 | |
| 237 | A | A | -0.5005 | |
| 238 | G | A | -0.2303 | |
| 239 | T | A | 0.0000 | |
| 240 | K | A | -0.5597 | |
| 241 | L | A | 0.0000 | |
| 242 | E | A | -0.3671 | |
| 243 | L | A | -0.2807 | |
| 244 | K | A | -1.3649 |