| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKDGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGRGSVGHPLWNKLGDTENPTAPLHDGADVRVNFSFDPKQTQLFIVGCEPPTGEHWDLAPPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRAGPEGHPLPAAPPPSPLYVRPPPTSPYAVPPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPAINVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9434 | |
| 2 | L | A | 1.9648 | |
| 3 | P | A | 0.8285 | |
| 4 | P | A | 0.3731 | |
| 5 | T | A | 0.1236 | |
| 6 | T | A | 0.1295 | |
| 7 | P | A | 0.1680 | |
| 8 | V | A | 1.2087 | |
| 9 | A | A | 0.0890 | |
| 10 | K | A | -1.0128 | |
| 11 | V | A | -0.1482 | |
| 12 | Q | A | -1.3753 | |
| 13 | S | A | -1.5285 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3727 | |
| 16 | E | A | -2.4126 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4669 | |
| 20 | P | A | 0.1350 | |
| 21 | T | A | 0.1796 | |
| 22 | S | A | -0.0948 | |
| 23 | L | A | 0.1008 | |
| 24 | F | A | -0.0140 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.3181 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9115 | |
| 31 | R | A | -2.6874 | |
| 32 | L | A | -0.8067 | |
| 33 | L | A | 1.1502 | |
| 34 | T | A | 1.3626 | |
| 35 | V | A | 1.8210 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2348 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6105 | |
| 40 | K | A | -1.6432 | |
| 41 | D | A | -0.9596 | |
| 42 | I | A | 0.8016 | |
| 43 | V | A | 0.8660 | |
| 44 | K | A | -1.4279 | |
| 45 | D | A | -2.4460 | |
| 46 | G | A | -1.4903 | |
| 47 | K | A | -1.1537 | |
| 48 | V | A | 1.3065 | |
| 49 | V | A | 1.9247 | |
| 50 | V | A | 1.2214 | |
| 51 | P | A | 0.4124 | |
| 52 | K | A | -0.6601 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1541 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4035 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2733 | |
| 70 | K | A | -1.7945 | |
| 71 | F | A | -0.6512 | |
| 72 | A | A | -0.5894 | |
| 73 | L | A | -0.8748 | |
| 74 | P | A | -1.2109 | |
| 75 | Q | A | -2.5020 | |
| 76 | K | A | -3.1064 | |
| 77 | D | A | -2.9837 | |
| 78 | F | A | -1.6706 | |
| 79 | Y | A | -1.8796 | |
| 80 | D | A | -2.6687 | |
| 81 | P | A | -2.2973 | |
| 82 | E | A | -3.0443 | |
| 83 | K | A | -3.3952 | |
| 84 | E | A | -2.4577 | |
| 85 | R | A | -1.2878 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6385 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9659 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3599 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6996 | |
| 99 | G | A | -0.5405 | |
| 100 | P | A | -0.3805 | |
| 101 | L | A | 0.0915 | |
| 102 | G | A | -0.0775 | |
| 103 | R | A | -0.3627 | |
| 104 | G | A | -0.3436 | |
| 105 | S | A | -0.4547 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.1048 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1282 | |
| 110 | L | A | -0.1451 | |
| 111 | W | A | 0.0000 | |
| 112 | N | A | -1.1336 | |
| 113 | K | A | -0.4831 | |
| 114 | L | A | -1.0932 | |
| 115 | G | A | -0.8789 | |
| 116 | D | A | -1.0804 | |
| 117 | T | A | -0.7778 | |
| 118 | E | A | -1.6989 | |
| 119 | N | A | -1.9245 | |
| 120 | P | A | -1.2999 | |
| 121 | T | A | -0.6586 | |
| 122 | A | A | -0.4043 | |
| 123 | P | A | -0.1082 | |
| 124 | L | A | -0.7040 | |
| 125 | H | A | -1.5526 | |
| 126 | D | A | -2.7073 | |
| 127 | G | A | -2.0565 | |
| 128 | A | A | -1.4246 | |
| 129 | D | A | -2.1375 | |
| 130 | V | A | -1.3822 | |
| 131 | R | A | -1.0438 | |
| 132 | V | A | -0.2300 | |
| 133 | N | A | -0.8660 | |
| 134 | F | A | -0.3584 | |
| 135 | S | A | -0.3687 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5916 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5571 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2107 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.2181 | |
| 157 | D | A | 0.5631 | |
| 158 | L | A | 1.1930 | |
| 159 | A | A | 0.9639 | |
| 160 | P | A | 0.0937 | |
| 161 | P | A | 0.4484 | |
| 162 | C | A | 0.5079 | |
| 163 | P | A | 0.0031 | |
| 164 | G | A | -0.1003 | |
| 165 | L | A | 0.5498 | |
| 166 | P | A | -0.1285 | |
| 167 | P | A | -0.3467 | |
| 168 | G | A | -0.4535 | |
| 169 | A | A | -0.0321 | |
| 170 | C | A | 0.6421 | |
| 171 | P | A | 0.7474 | |
| 172 | P | A | 1.1952 | |
| 173 | I | A | 2.3280 | |
| 174 | Q | A | 1.2710 | |
| 175 | L | A | 1.5938 | |
| 176 | V | A | 0.9060 | |
| 177 | N | A | -0.2829 | |
| 178 | S | A | -0.0914 | |
| 179 | V | A | 0.4312 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3864 | |
| 182 | D | A | 0.0813 | |
| 183 | G | A | -0.1579 | |
| 184 | D | A | -0.5351 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1322 | |
| 190 | F | A | 0.0652 | |
| 191 | G | A | -0.1102 | |
| 192 | N | A | -0.2640 | |
| 193 | M | A | -0.0976 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3868 | |
| 197 | E | A | -2.5842 | |
| 198 | L | A | -1.2222 | |
| 199 | Q | A | -2.5587 | |
| 200 | Q | A | -3.3139 | |
| 201 | D | A | -3.4754 | |
| 202 | R | A | -3.3194 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2326 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3508 | |
| 211 | S | A | -1.8903 | |
| 212 | T | A | -1.4268 | |
| 213 | R | A | -2.0653 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1867 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.4106 | |
| 220 | L | A | 0.6007 | |
| 221 | K | A | -1.1371 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8230 | |
| 224 | N | A | -1.5065 | |
| 225 | E | A | -1.2494 | |
| 226 | A | A | -0.6071 | |
| 227 | Y | A | -0.3715 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6876 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.1954 | |
| 234 | F | A | 0.6726 | |
| 235 | G | A | -0.3435 | |
| 236 | R | A | -1.6961 | |
| 237 | R | A | -2.1470 | |
| 238 | E | A | -1.3209 | |
| 239 | Q | A | 0.1914 | |
| 240 | V | A | 1.6121 | |
| 241 | Y | A | 1.1378 | |
| 242 | A | A | 0.2478 | |
| 243 | R | A | -0.8689 | |
| 244 | H | A | -0.8768 | |
| 245 | F | A | 0.1071 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.8786 | |
| 249 | A | A | -1.3797 | |
| 250 | G | A | -1.2364 | |
| 251 | P | A | -1.2333 | |
| 252 | E | A | -1.3617 | |
| 253 | G | A | -1.2781 | |
| 254 | H | A | -1.4706 | |
| 255 | P | A | -0.9991 | |
| 256 | L | A | 0.4290 | |
| 257 | P | A | 0.0783 | |
| 258 | A | A | 0.1070 | |
| 259 | A | A | -0.0013 | |
| 260 | P | A | -0.5473 | |
| 261 | P | A | -0.5208 | |
| 262 | P | A | -0.1725 | |
| 263 | S | A | 0.2902 | |
| 264 | P | A | 0.7071 | |
| 265 | L | A | 1.7583 | |
| 266 | Y | A | 1.3714 | |
| 267 | V | A | 1.1023 | |
| 268 | R | A | -0.5918 | |
| 269 | P | A | -0.1948 | |
| 270 | P | A | -0.3676 | |
| 271 | P | A | -0.3113 | |
| 272 | T | A | -0.0296 | |
| 273 | S | A | 0.0447 | |
| 274 | P | A | 0.3234 | |
| 275 | Y | A | 0.9653 | |
| 276 | A | A | 0.6986 | |
| 277 | V | A | 1.6478 | |
| 278 | P | A | 0.8056 | |
| 279 | P | A | -0.1216 | |
| 280 | P | A | -0.7125 | |
| 281 | T | A | -0.5168 | |
| 282 | D | A | -1.1651 | |
| 283 | Y | A | 0.7224 | |
| 284 | F | A | 0.6338 | |
| 285 | G | A | 0.2735 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9692 | |
| 291 | L | A | 1.6659 | |
| 292 | V | A | 0.6496 | |
| 293 | S | A | -0.1651 | |
| 294 | S | A | -0.9621 | |
| 295 | D | A | -1.8417 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -0.9689 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6275 | |
| 301 | R | A | -1.8354 | |
| 302 | P | A | -0.9518 | |
| 303 | F | A | -0.1627 | |
| 304 | W | A | -0.5598 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0790 | |
| 307 | R | A | -2.8270 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2307 | |
| 310 | G | A | -1.2303 | |
| 311 | N | A | -1.2618 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8287 | |
| 319 | N | A | -0.9420 | |
| 320 | E | A | -1.0391 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.2756 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0061 | |
| 333 | N | A | 0.5654 | |
| 334 | F | A | 1.7269 | |
| 335 | T | A | 0.8619 | |
| 336 | I | A | 0.4377 | |
| 337 | S | A | -0.8560 | |
| 338 | Q | A | -1.5405 | |
| 339 | Q | A | -0.8857 | |
| 340 | L | A | 0.8364 | |
| 341 | C | A | 0.5149 | |
| 342 | T | A | 0.2718 | |
| 343 | P | A | -0.1077 | |
| 344 | A | A | 0.3669 | |
| 345 | I | A | 0.7312 | |
| 346 | N | A | 0.0229 | |
| 347 | V | A | 1.7508 | |
| 348 | Y | A | 1.5827 | |
| 349 | D | A | 0.0758 | |
| 350 | P | A | -0.3495 | |
| 351 | S | A | -0.2894 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.6407 | |
| 354 | K | A | -1.7031 | |
| 355 | N | A | -1.7188 | |
| 356 | Y | A | -0.1081 | |
| 357 | L | A | 0.6344 | |
| 358 | R | A | 0.9562 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3727 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0858 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0679 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6935 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3021 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3211 | |
| 376 | L | A | -1.7244 | |
| 377 | D | A | -2.0172 | |
| 378 | P | A | -1.0492 | |
| 379 | G | A | -1.0212 | |
| 380 | V | A | -0.9374 | |
| 381 | L | A | -0.5391 | |
| 382 | A | A | -0.6598 | |
| 383 | H | A | -0.8073 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4093 | |
| 386 | T | A | -0.5484 | |
| 387 | M | A | -0.2985 | |
| 388 | N | A | -0.8648 | |
| 389 | P | A | -1.2463 | |
| 390 | T | A | -1.4492 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4510 | |
| 393 | E | A | -2.7822 | |
| 394 | N | A | -2.4076 | |
| 395 | W | A | -1.3913 | |
| 396 | N | A | -1.1387 | |
| 397 | L | A | -0.2129 | |
| 398 | G | A | 0.5111 | |
| 399 | F | A | 2.4079 | |
| 400 | V | A | 1.8106 | |
| 401 | P | A | 0.0473 | |
| 402 | P | A | -1.8426 | |
| 403 | K | A | -3.3242 | |
| 404 | E | A | -3.7846 | |
| 405 | R | A | -3.9338 | |
| 406 | E | A | -3.7979 | |
| 407 | D | A | -2.8794 | |
| 408 | P | A | -1.7696 | |
| 409 | Y | A | -0.9865 | |
| 410 | K | A | -2.1136 | |
| 411 | G | A | -0.6355 | |
| 412 | L | A | 0.6805 | |
| 413 | I | A | 1.5885 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3951 | |
| 416 | E | A | -1.6914 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9645 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0767 | |
| 421 | E | A | -2.8223 | |
| 422 | R | A | -2.7142 | |
| 423 | F | A | -1.3114 | |
| 424 | S | A | -1.4725 | |
| 425 | Q | A | -1.8293 | |
| 426 | D | A | -2.9549 | |
| 427 | L | A | -2.1478 | |
| 428 | D | A | -3.0208 | |
| 429 | Q | A | -2.7508 | |
| 430 | F | A | -1.6039 | |
| 431 | A | A | -1.1194 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.2220 | |
| 435 | K | A | -1.0520 | |
| 436 | F | A | -0.0774 | |
| 437 | L | A | 0.8055 | |
| 438 | Y | A | 0.6469 | |
| 439 | Q | A | -0.3751 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine