| Chain sequence(s) |
A: DFMLSQPHSVSESPGKTVTISCTRSSGLIGSNYVQWFQQRPGSAPTTVIYEDVQRPSGVPDRFSGSIDSSSNSASLTISGLQSEDEADYYCQSYDTKTWVFGGGTKLTVL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:00)
[INFO] Main: Simulation completed successfully. (00:01:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -1.7206 | |
| 2 | F | A | 0.0000 | |
| 3 | M | A | 0.5441 | |
| 4 | L | A | 0.0000 | |
| 5 | S | A | -0.1945 | |
| 6 | Q | A | -0.5374 | |
| 7 | P | A | -0.8742 | |
| 8 | H | A | -1.4338 | |
| 9 | S | A | -0.9199 | |
| 10 | V | A | -0.4370 | |
| 11 | S | A | -0.1574 | |
| 12 | E | A | -0.5739 | |
| 13 | S | A | -0.4419 | |
| 14 | P | A | -0.8913 | |
| 15 | G | A | -1.5909 | |
| 16 | K | A | -1.9844 | |
| 17 | T | A | -1.1935 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.1759 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.1554 | |
| 22 | C | A | 0.0000 | |
| 23 | T | A | -0.2567 | |
| 24 | R | A | -0.1378 | |
| 25 | S | A | -0.2876 | |
| 26 | S | A | -0.4016 | |
| 27 | G | A | -0.3485 | |
| 28 | L | A | 0.3670 | |
| 29 | I | A | 0.0000 | |
| 30 | G | A | -0.2659 | |
| 31 | S | A | -0.1051 | |
| 32 | N | A | -0.1711 | |
| 33 | Y | A | 0.5687 | |
| 34 | V | A | 0.0000 | |
| 35 | Q | A | 0.2220 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0671 | |
| 38 | Q | A | 0.0000 | |
| 39 | Q | A | -1.5048 | |
| 40 | R | A | -2.3462 | |
| 41 | P | A | -1.4241 | |
| 42 | G | A | -1.0153 | |
| 43 | S | A | -0.9248 | |
| 44 | A | A | -0.5460 | |
| 45 | P | A | -0.6926 | |
| 46 | T | A | -0.3209 | |
| 47 | T | A | -0.0576 | |
| 48 | V | A | 0.0000 | |
| 49 | I | A | 0.0000 | |
| 50 | Y | A | -0.1291 | |
| 51 | E | A | -0.5390 | |
| 52 | D | A | 0.0969 | |
| 53 | V | A | 0.9183 | |
| 54 | Q | A | -0.7405 | |
| 55 | R | A | -1.2066 | |
| 56 | P | A | -0.8858 | |
| 57 | S | A | -0.8551 | |
| 58 | G | A | -0.8292 | |
| 59 | V | A | -0.7661 | |
| 60 | P | A | -1.2482 | |
| 61 | D | A | -2.2033 | |
| 62 | R | A | -1.3365 | |
| 63 | F | A | 0.0000 | |
| 64 | S | A | -0.4286 | |
| 65 | G | A | 0.0000 | |
| 66 | S | A | -0.0262 | |
| 67 | I | A | -0.0064 | |
| 68 | D | A | -1.1625 | |
| 69 | S | A | -0.7590 | |
| 70 | S | A | -0.6172 | |
| 71 | S | A | -0.6166 | |
| 72 | N | A | -0.6338 | |
| 73 | S | A | -0.5814 | |
| 74 | A | A | 0.0000 | |
| 75 | S | A | -0.1136 | |
| 76 | L | A | 0.0000 | |
| 77 | T | A | -0.2410 | |
| 78 | I | A | 0.0000 | |
| 79 | S | A | -1.2126 | |
| 80 | G | A | -1.4250 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.8421 | |
| 83 | S | A | -1.5105 | |
| 84 | E | A | -2.5658 | |
| 85 | D | A | 0.0000 | |
| 86 | E | A | -2.0247 | |
| 87 | A | A | 0.0000 | |
| 88 | D | A | -1.6711 | |
| 89 | Y | A | 0.0000 | |
| 90 | Y | A | 0.1626 | |
| 91 | C | A | 0.0000 | |
| 92 | Q | A | 0.0000 | |
| 93 | S | A | 0.0000 | |
| 94 | Y | A | 0.5303 | |
| 95 | D | A | -0.4840 | |
| 96 | T | A | -1.0563 | |
| 97 | K | A | -1.4606 | |
| 98 | T | A | -0.3854 | |
| 99 | W | A | 1.1888 | |
| 100 | V | A | 0.0000 | |
| 101 | F | A | 1.8161 | |
| 102 | G | A | 0.5583 | |
| 103 | G | A | -0.4022 | |
| 104 | G | A | -0.6120 | |
| 105 | T | A | 0.0000 | |
| 106 | K | A | -1.4506 | |
| 107 | L | A | 0.0000 | |
| 108 | T | A | -0.3153 | |
| 109 | V | A | -0.2181 | |
| 110 | L | A | 1.1639 |