Project name: e6fbd4c9d1a4d9d [mutate: FY146A, FY260A, FY262A, VW181A, IT150A, IT132A, LQ133A, VT121A, VT53A] [mutate: WT181A]

Status: done

Started: 2024-06-11 20:03:02
Settings
Chain sequence(s) A: DTIREYLMFNELSALSSSPESVRSRFSSIYGTNPDGIALNNETYFNAVKPPITAQYGYYCYKNVGTVQYTNRPTDINPNVTQAQDTLTNNTNEPYTTTTTITGSFTNTSTVTSSTTTGFKFTSKLSIKKWFEIGGEVSFSTTIGTSETTTETITVSKSVTVTVPAQSRRTIQLTAKIAKESADFSAPITVDGYFGANFPKRVGPGGHYYWYNPARDVLNTTSGTLRGTVTNVSSFDFQTIVQPARSL
B: MDVIREYLMFNELSALSSSPESVRSRFSSIYGTNPDGIALNNETYFNAVKPPITAQYGYYCYKNVGTVQYVNRPTDINPNVILAQDTLTNNTNEPFTTTITITGSFTNTSTVTSSTTTGFKFTSKLSIKKVFEIGGEVSFSTTIGTSETTTETITVSKSVTVTVPAQSRRTIQLTAKIAKESADFSAPITVDGYFGANFPKRVGPGGHYFWFNPARDVLNTTSGTLRGTVTNVSSFDFQTIVQPARSL
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues WT181A
Energy difference between WT (input) and mutated protein (by FoldX) -0.147182 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:01:14)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:01:18)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:33)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:36)
Show buried residues

Minimal score value
-2.7784
Maximal score value
1.0665
Average score
-0.6754
Total score value
-334.3229

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
52 D A -2.1475
53 T A -1.4181
54 I A 0.0000
55 R A -2.0171
56 E A -0.7504
57 Y A 0.1385
58 L A 0.0000
59 M A -0.4567
60 F A 0.0000
61 N A -1.4143
62 E A 0.0000
63 L A 0.0000
64 S A -0.7891
65 A A 0.0000
66 L A 0.0000
67 S A -0.7098
68 S A 0.0000
69 S A -1.2447
70 P A -1.1852
71 E A -2.0817
72 S A -1.6882
73 V A 0.0000
74 R A -1.6837
75 S A -1.7441
76 R A -1.9152
77 F A 0.0000
78 S A -1.1649
79 S A -0.6667
80 I A -0.0203
81 Y A -0.3933
82 G A -0.7025
83 T A -1.3629
84 N A -1.9203
85 P A 0.0000
86 D A -1.1707
87 G A 0.0000
88 I A 0.0000
89 A A 0.0000
90 L A 0.0000
91 N A 0.0000
92 N A -1.9162
93 E A -1.7140
94 T A -0.8000
95 Y A 0.0897
96 F A -0.0008
97 N A -1.0885
98 A A -0.7198
99 V A -0.5370
100 K A -2.1432
101 P A -1.7407
102 P A 0.0000
103 I A 0.0000
104 T A 0.0000
105 A A -0.6438
106 Q A -0.7283
107 Y A 0.9445
108 G A 0.3353
109 Y A 0.8631
110 Y A 0.8150
111 C A 0.0000
112 Y A -0.0248
113 K A 0.0000
114 N A -1.0329
115 V A 0.0000
116 G A -0.9071
117 T A -0.6915
118 V A -1.0033
119 Q A -1.1439
120 Y A -1.0424
121 T A -1.1998
122 N A -1.9586
123 R A -2.3455
124 P A -1.7132
125 T A -2.0712
126 D A -2.5141
127 I A -1.5606
128 N A -2.1210
129 P A -1.6090
130 N A -1.7089
131 V A -0.6867
132 T A -0.5702
133 Q A -0.6000
134 A A -0.9945
135 Q A -1.7891
136 D A -1.7495
137 T A -1.2200
138 L A -0.7655
139 T A -1.1594
140 N A 0.0000
141 N A -2.0951
142 T A -2.1179
143 N A -2.7063
144 E A -2.7784
145 P A -1.4776
146 Y A -0.2266
147 T A 0.0682
148 T A 0.0111
149 T A -0.2129
150 T A -0.2655
151 T A -0.3710
152 I A 0.0000
153 T A -0.5428
154 G A 0.0000
155 S A -0.2221
156 F A -0.0544
157 T A -0.2632
158 N A -0.3375
159 T A -0.3927
160 S A -0.7004
161 T A -0.4385
162 V A 0.0000
163 T A -0.7303
164 S A 0.0000
165 S A -1.0337
166 T A -0.9123
167 T A -0.4748
168 T A -0.5319
169 G A -0.8812
170 F A 0.0000
171 K A -1.6372
172 F A 0.0000
173 T A -1.0079
174 S A -1.6326
175 K A -2.0939
176 L A 0.0000
177 S A -1.5415
178 I A 0.0000
179 K A -2.4023
180 K A -1.9470
181 T A -1.7875 mutated: WT181A
182 F A 0.0000
183 E A -2.0120
184 I A -0.8980
185 G A -1.1207
186 G A -1.3841
187 E A -2.4213
188 V A 0.0000
189 S A -1.4959
190 F A 0.0000
191 S A -1.3583
192 T A 0.0000
193 T A -1.1941
194 I A 0.0000
195 G A -1.0168
196 T A -0.6238
197 S A -0.8491
198 E A -1.1673
199 T A -0.6706
200 T A -0.5168
201 T A -0.4283
202 E A -0.6886
203 T A -0.4391
204 I A 0.0000
205 T A -0.1892
206 V A 0.0000
207 S A -0.2211
208 K A -0.3826
209 S A -0.3761
210 V A 0.0000
211 T A -0.1954
212 V A 0.0000
213 T A -0.0424
214 V A 0.0000
215 P A -1.5935
216 A A -1.9456
217 Q A -2.1921
218 S A 0.0000
219 R A -2.0031
220 R A -1.5623
221 T A 0.0000
222 I A 0.0000
223 Q A -0.8964
224 L A 0.0000
225 T A 0.0000
226 A A 0.0000
227 K A -1.3018
228 I A -1.0507
229 A A 0.0000
230 K A -2.1892
231 E A 0.0000
232 S A 0.0000
233 A A 0.0000
234 D A -1.2985
235 F A 0.0000
236 S A -0.9379
237 A A 0.0000
238 P A -0.6548
239 I A 0.0000
240 T A -0.5689
241 V A 0.0000
242 D A -0.7057
243 G A -0.0528
244 Y A 0.2147
245 F A 0.0000
246 G A 0.0000
247 A A 0.0000
248 N A 0.0000
249 F A 0.0000
250 P A -1.6751
251 K A -2.7115
252 R A -2.7012
253 V A 0.0000
254 G A -0.7390
255 P A -0.9271
256 G A -1.1150
257 G A -1.4952
258 H A -1.2750
259 Y A -0.4337
260 Y A 0.4743
261 W A 0.7134
262 Y A 0.6169
263 N A -0.2239
264 P A -0.7261
265 A A 0.0000
266 R A -2.4721
267 D A -1.8093
268 V A 0.0000
269 L A 0.0000
270 N A -1.9700
271 T A -1.2549
272 T A -1.0923
273 S A -0.7319
274 G A -0.3509
275 T A -0.5961
276 L A 0.0000
277 R A -1.4903
278 G A 0.0000
279 T A -0.7030
280 V A 0.0000
281 T A -0.5477
282 N A 0.0000
283 V A -0.5067
284 S A 0.0000
285 S A 0.0000
286 F A -0.0913
287 D A -0.8535
288 F A -0.2880
289 Q A -0.6427
290 T A -0.4740
291 I A -0.2243
292 V A -0.4600
293 Q A -1.0391
294 P A -1.1966
295 A A -1.6117
296 R A -2.3240
297 S A -0.9908
298 L A 0.1909
51 M B 0.5369
52 D B -0.9154
53 V B -0.3242
54 I B 0.0000
55 R B -1.5554
56 E B -0.6031
57 Y B 0.2720
58 L B 0.0000
59 M B -0.4185
60 F B 0.0000
61 N B -1.4295
62 E B 0.0000
63 L B 0.0000
64 S B -0.7979
65 A B 0.0000
66 L B 0.0000
67 S B -0.7400
68 S B 0.0000
69 S B -1.2536
70 P B -1.1049
71 E B -2.1048
72 S B -1.6920
73 V B 0.0000
74 R B -1.7672
75 S B -1.7197
76 R B -1.8018
77 F B 0.0000
78 S B -1.1208
79 S B -0.5982
80 I B 0.0932
81 Y B -0.3314
82 G B -0.6668
83 T B -1.3314
84 N B -1.7353
85 P B 0.0000
86 D B -1.2641
87 G B 0.0000
88 I B 0.0000
89 A B 0.0000
90 L B 0.0000
91 N B 0.0000
92 N B -1.6592
93 E B -1.3505
94 T B -0.5960
95 Y B 0.1629
96 F B -0.0235
97 N B -1.0723
98 A B -0.6030
99 V B -0.3920
100 K B -1.9927
101 P B -1.5752
102 P B 0.0000
103 I B 0.0000
104 T B 0.0000
105 A B -0.6218
106 Q B -0.6440
107 Y B 0.9896
108 G B 0.3860
109 Y B 0.8240
110 Y B 0.7673
111 C B 0.0000
112 Y B -0.0017
113 K B 0.0000
114 N B 0.0000
115 V B 0.0000
116 G B -0.4561
117 T B -0.1373
118 V B -0.7302
119 Q B -0.8137
120 Y B -0.1463
121 V B 0.4626
122 N B -1.4151
123 R B -2.5639
124 P B -1.8431
125 T B -2.2043
126 D B -2.5080
127 I B -1.4251
128 N B -2.0526
129 P B -1.5952
130 N B -1.3148
131 V B 0.0604
132 I B 1.0665
133 L B 0.5184
134 A B -0.4720
135 Q B -1.6106
136 D B -2.2241
137 T B -1.3621
138 L B -0.6037
139 T B -1.1023
140 N B 0.0000
141 N B -2.0882
142 T B -2.0425
143 N B -2.6720
144 E B -2.7236
145 P B -1.3656
146 F B -0.0111
147 T B 0.1958
148 T B 0.1665
149 T B -0.0269
150 I B 0.0710
151 T B -0.2586
152 I B 0.0000
153 T B -0.4974
154 G B 0.0000
155 S B -0.0989
156 F B 0.1039
157 T B -0.1903
158 N B -0.2477
159 T B -0.3238
160 S B 0.0000
161 T B -0.3881
162 V B 0.0000
163 T B -0.7857
164 S B 0.0000
165 S B -1.2049
166 T B -1.0970
167 T B -0.6302
168 T B -0.5795
169 G B -0.9802
170 F B 0.0000
171 K B -1.6894
172 F B 0.0000
173 T B -0.9196
174 S B -1.3307
175 K B -1.7693
176 L B 0.0000
177 S B -1.0189
178 I B 0.0000
179 K B -1.8566
180 K B -1.0313
181 V B 0.0706
182 F B 0.0000
183 E B -1.5945
184 I B -0.7420
185 G B -0.8277
186 G B -0.8999
187 E B -1.6622
188 V B 0.0000
189 S B -1.2095
190 F B 0.0000
191 S B -1.1838
192 T B 0.0000
193 T B -1.1006
194 I B -1.0994
195 G B -1.0004
196 T B -0.5539
197 S B -0.7830
198 E B -1.0501
199 T B -0.5850
200 T B -0.4406
201 T B -0.3508
202 E B -0.5633
203 T B -0.3513
204 I B 0.0000
205 T B -0.1457
206 V B 0.0000
207 S B -0.2302
208 K B -0.3596
209 S B -0.2936
210 V B 0.0000
211 T B -0.0724
212 V B 0.0000
213 T B 0.0881
214 V B 0.0000
215 P B -1.5538
216 A B -2.0213
217 Q B -2.2781
218 S B 0.0000
219 R B -1.7695
220 R B -1.4888
221 T B -1.2845
222 I B 0.0000
223 Q B -0.3971
224 L B 0.0000
225 T B 0.0000
226 A B 0.0000
227 K B -0.9080
228 I B -0.9783
229 A B 0.0000
230 K B -2.1294
231 E B 0.0000
232 S B -1.3638
233 A B 0.0000
234 D B -0.9367
235 F B 0.0000
236 S B -0.9643
237 A B 0.0000
238 P B -0.7471
239 I B 0.0000
240 T B -0.7290
241 V B 0.0000
242 D B -1.3965
243 G B -0.3772
244 Y B 0.1416
245 F B 0.0000
246 G B 0.0000
247 A B 0.0000
248 N B 0.0000
249 F B 0.0000
250 P B -1.5894
251 K B -2.4655
252 R B -2.5484
253 V B 0.0000
254 G B -0.7386
255 P B -0.9762
256 G B -1.0255
257 G B -1.4620
258 H B -1.1468
259 Y B -0.0453
260 F B 0.7601
261 W B 0.6000
262 F B 0.8702
263 N B 0.0000
264 P B -0.7386
265 A B 0.0000
266 R B -2.5638
267 D B -1.5750
268 V B 0.0000
269 L B 0.0000
270 N B -1.9454
271 T B -1.2707
272 T B -1.2456
273 S B -0.8020
274 G B -0.3199
275 T B -0.7296
276 L B 0.0000
277 R B -2.1864
278 G B -1.1278
279 T B -0.7104
280 V B 0.0000
281 T B -0.5980
282 N B 0.0000
283 V B -0.4435
284 S B -0.1424
285 S B 0.0000
286 F B -0.0640
287 D B -0.7897
288 F B 0.0015
289 Q B -0.4153
290 T B -0.0318
291 I B 0.3946
292 V B -0.0366
293 Q B -0.4859
294 P B -0.8677
295 A B -1.4516
296 R B -2.2354
297 S B -1.1200
298 L B 0.2002
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Laboratory of Theory of Biopolymers 2018