| Chain sequence(s) |
A: MGEVQLVESGGGSVQAGGSLRLSCAASGVSNTDMIMIWFRQAPGKEREGVLAAIYKNSTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYYCAAISAVIGRHIRPHIYWGQGTQVTVGGGS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:44)
[INFO] Main: Simulation completed successfully. (00:01:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.4758 | |
| 2 | G | A | -0.9921 | |
| 3 | E | A | -1.9636 | |
| 4 | V | A | -0.8633 | |
| 5 | Q | A | -0.9192 | |
| 6 | L | A | 0.0000 | |
| 7 | V | A | 1.3009 | |
| 8 | E | A | 0.0000 | |
| 9 | S | A | -0.5766 | |
| 10 | G | A | -1.2450 | |
| 11 | G | A | -1.1802 | |
| 12 | G | A | -0.9455 | |
| 13 | S | A | -0.7429 | |
| 14 | V | A | -0.8739 | |
| 15 | Q | A | -1.8575 | |
| 16 | A | A | -1.9239 | |
| 17 | G | A | -1.4250 | |
| 18 | G | A | -1.0553 | |
| 19 | S | A | -1.1805 | |
| 20 | L | A | -1.1272 | |
| 21 | R | A | -2.1759 | |
| 22 | L | A | 0.0000 | |
| 23 | S | A | -0.4101 | |
| 24 | C | A | 0.0000 | |
| 25 | A | A | -0.0350 | |
| 26 | A | A | 0.0000 | |
| 27 | S | A | -0.6262 | |
| 28 | G | A | -0.7772 | |
| 29 | V | A | -0.1092 | |
| 30 | S | A | -0.7155 | |
| 31 | N | A | 0.0000 | |
| 32 | T | A | -1.4002 | |
| 33 | D | A | -0.9364 | |
| 34 | M | A | 0.0000 | |
| 35 | I | A | 0.4007 | |
| 36 | M | A | 0.0000 | |
| 37 | I | A | 0.0000 | |
| 38 | W | A | 0.0000 | |
| 39 | F | A | 0.1669 | |
| 40 | R | A | 0.0000 | |
| 41 | Q | A | -1.7273 | |
| 42 | A | A | -1.8370 | |
| 43 | P | A | -1.5951 | |
| 44 | G | A | -1.9713 | |
| 45 | K | A | -3.2571 | |
| 46 | E | A | -3.4539 | |
| 47 | R | A | -2.5967 | |
| 48 | E | A | -1.6347 | |
| 49 | G | A | -0.7301 | |
| 50 | V | A | 0.5153 | |
| 51 | L | A | 0.0000 | |
| 52 | A | A | 0.0000 | |
| 53 | A | A | 0.8251 | |
| 54 | I | A | 0.0000 | |
| 55 | Y | A | -0.5397 | |
| 56 | K | A | -2.1579 | |
| 57 | N | A | -2.0425 | |
| 58 | S | A | -0.8410 | |
| 59 | T | A | 0.1111 | |
| 60 | Y | A | 0.9758 | |
| 61 | Y | A | -0.1713 | |
| 62 | A | A | -0.9961 | |
| 63 | D | A | -2.3476 | |
| 64 | S | A | -1.8299 | |
| 65 | V | A | 0.0000 | |
| 66 | K | A | -2.4830 | |
| 67 | G | A | -1.7974 | |
| 68 | R | A | -1.5099 | |
| 69 | F | A | 0.0000 | |
| 70 | T | A | -0.7517 | |
| 71 | I | A | 0.0000 | |
| 72 | S | A | -0.7169 | |
| 73 | Q | A | -1.5914 | |
| 74 | D | A | -2.0522 | |
| 75 | N | A | -2.3477 | |
| 76 | A | A | -1.7424 | |
| 77 | K | A | -2.4856 | |
| 78 | N | A | -1.7907 | |
| 79 | T | A | 0.0000 | |
| 80 | V | A | 0.0000 | |
| 81 | Y | A | 0.0000 | |
| 82 | L | A | 0.0000 | |
| 83 | Q | A | -1.2812 | |
| 84 | M | A | 0.0000 | |
| 85 | N | A | -1.3911 | |
| 86 | S | A | -1.1836 | |
| 87 | L | A | 0.0000 | |
| 88 | K | A | -2.4361 | |
| 89 | P | A | -2.0627 | |
| 90 | E | A | -2.4102 | |
| 91 | D | A | 0.0000 | |
| 92 | T | A | -1.1172 | |
| 93 | A | A | 0.0000 | |
| 94 | I | A | -0.4391 | |
| 95 | Y | A | 0.0000 | |
| 96 | Y | A | 0.0000 | |
| 97 | C | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | I | A | 0.7739 | |
| 101 | S | A | 0.6283 | |
| 102 | A | A | 1.1292 | |
| 103 | V | A | 2.3754 | |
| 104 | I | A | 2.0605 | |
| 105 | G | A | 0.2675 | |
| 106 | R | A | -1.4859 | |
| 107 | H | A | -1.0031 | |
| 108 | I | A | 0.6412 | |
| 109 | R | A | -1.2578 | |
| 110 | P | A | -0.2319 | |
| 111 | H | A | -0.6752 | |
| 112 | I | A | 0.4197 | |
| 113 | Y | A | 0.4667 | |
| 114 | W | A | 0.8391 | |
| 115 | G | A | 0.1816 | |
| 116 | Q | A | -0.7409 | |
| 117 | G | A | -0.4236 | |
| 118 | T | A | 0.0000 | |
| 119 | Q | A | -1.2733 | |
| 120 | V | A | 0.0000 | |
| 121 | T | A | -1.0366 | |
| 122 | V | A | 0.0000 | |
| 123 | G | A | -1.5114 | |
| 124 | G | A | -1.6213 | |
| 125 | G | A | -1.3926 | |
| 126 | S | A | -0.7210 |