| Chain sequence(s) |
A: FEFEFEGKGH
C: FEFEFEGKGH B: FEFEFEGKGH D: FEFEFEGKGH input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:03)
[INFO] Main: Simulation completed successfully. (00:01:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 0.9011 | |
| 2 | E | A | -1.8256 | |
| 3 | F | A | -2.0869 | |
| 4 | E | A | -3.8164 | |
| 5 | F | A | -2.6591 | |
| 6 | E | A | -4.0323 | |
| 7 | G | A | -2.9463 | |
| 8 | K | A | -3.7925 | |
| 9 | G | A | 0.0000 | |
| 10 | H | A | -1.5237 | |
| 1 | F | B | 1.1652 | |
| 2 | E | B | -1.5218 | |
| 3 | F | B | -1.2012 | |
| 4 | E | B | -2.8482 | |
| 5 | F | B | -1.2376 | |
| 6 | E | B | -3.2082 | |
| 7 | G | B | -2.2055 | |
| 8 | K | B | -3.2947 | |
| 9 | G | B | -1.5455 | |
| 10 | H | B | -1.4554 | |
| 1 | F | C | 1.1451 | |
| 2 | E | C | -1.5327 | |
| 3 | F | C | -1.2378 | |
| 4 | E | C | -2.8541 | |
| 5 | F | C | -1.2166 | |
| 6 | E | C | -3.1511 | |
| 7 | G | C | -2.1192 | |
| 8 | K | C | -3.2398 | |
| 9 | G | C | -1.5379 | |
| 10 | H | C | -1.4694 | |
| 1 | F | D | 0.8916 | |
| 2 | E | D | -1.8523 | |
| 3 | F | D | -1.9874 | |
| 4 | E | D | -3.6896 | |
| 5 | F | D | -2.5890 | |
| 6 | E | D | -4.0054 | |
| 7 | G | D | -2.9606 | |
| 8 | K | D | -3.7441 | |
| 9 | G | D | 0.0000 | |
| 10 | H | D | -1.5263 |