| Chain sequence(s) |
A: HHHHHHQKNVHEVKDHKFIARFFKQPTFCSHCTDFIWGFGKQGFQCQVCCFVVHKRCHEFVTFSCPGADKGPDTDDPRSKHKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINVPSLCGMDHTEKRGRIYLKAEVADEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMPASGWYKLLNQEEGEYYNVPIPEGDEEGNMELRQKFEKAKLG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:10:53)
[INFO] Main: Simulation completed successfully. (00:10:56)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | H | A | -1.8844 | |
| 2 | H | A | -2.4001 | |
| 3 | H | A | -2.6881 | |
| 4 | H | A | -2.8936 | |
| 5 | H | A | -3.0155 | |
| 6 | H | A | -3.1620 | |
| 7 | Q | A | -3.1572 | |
| 8 | K | A | -3.0448 | |
| 9 | N | A | -2.5890 | |
| 10 | V | A | -1.7100 | |
| 11 | H | A | -2.2382 | |
| 12 | E | A | -3.1326 | |
| 13 | V | A | -2.3656 | |
| 14 | K | A | -2.5284 | |
| 15 | D | A | -3.0662 | |
| 16 | H | A | 0.0000 | |
| 17 | K | A | -2.0835 | |
| 18 | F | A | 0.0000 | |
| 19 | I | A | -1.4792 | |
| 20 | A | A | -1.1529 | |
| 21 | R | A | -0.7613 | |
| 22 | F | A | 0.1884 | |
| 23 | F | A | 0.0000 | |
| 24 | K | A | -1.6156 | |
| 25 | Q | A | -0.9554 | |
| 26 | P | A | -0.0993 | |
| 27 | T | A | 0.0000 | |
| 28 | F | A | 0.5145 | |
| 29 | C | A | 0.0000 | |
| 30 | S | A | 0.0000 | |
| 31 | H | A | 0.0000 | |
| 32 | C | A | -1.1683 | |
| 33 | T | A | -1.1259 | |
| 34 | D | A | -1.2629 | |
| 35 | F | A | 0.5797 | |
| 36 | I | A | 0.0000 | |
| 37 | W | A | 1.3456 | |
| 38 | G | A | 1.2587 | |
| 39 | F | A | 1.7509 | |
| 40 | G | A | 0.2274 | |
| 41 | K | A | -0.6638 | |
| 42 | Q | A | -0.0619 | |
| 43 | G | A | 0.0000 | |
| 44 | F | A | 0.0000 | |
| 45 | Q | A | -0.3208 | |
| 46 | C | A | 0.0000 | |
| 47 | Q | A | -0.5211 | |
| 48 | V | A | 0.0824 | |
| 49 | C | A | 0.0000 | |
| 50 | C | A | 0.1821 | |
| 51 | F | A | 0.0000 | |
| 52 | V | A | 0.0000 | |
| 53 | V | A | 0.0000 | |
| 54 | H | A | -0.9885 | |
| 55 | K | A | -1.9208 | |
| 56 | R | A | -1.7373 | |
| 57 | C | A | 0.0000 | |
| 58 | H | A | -1.9809 | |
| 59 | E | A | -2.5730 | |
| 60 | F | A | 0.0000 | |
| 61 | V | A | 0.0000 | |
| 62 | T | A | -0.8387 | |
| 63 | F | A | 0.0000 | |
| 64 | S | A | -1.3231 | |
| 65 | C | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | G | A | -1.0414 | |
| 68 | A | A | -2.1170 | |
| 69 | D | A | -3.0934 | |
| 70 | K | A | -3.5038 | |
| 71 | G | A | -2.6312 | |
| 72 | P | A | -2.5119 | |
| 73 | D | A | -3.0716 | |
| 74 | T | A | -2.6418 | |
| 75 | D | A | -3.5848 | |
| 76 | D | A | -2.8378 | |
| 77 | P | A | -2.3741 | |
| 78 | R | A | -3.0074 | |
| 79 | S | A | -2.2285 | |
| 80 | K | A | -2.7432 | |
| 81 | H | A | -2.4487 | |
| 82 | K | A | -3.2663 | |
| 83 | F | A | -1.9865 | |
| 84 | K | A | -1.7756 | |
| 85 | I | A | 0.7952 | |
| 86 | H | A | 0.1015 | |
| 87 | T | A | 0.4827 | |
| 88 | Y | A | 0.1770 | |
| 89 | G | A | -0.1379 | |
| 90 | S | A | -0.4885 | |
| 91 | P | A | -0.1645 | |
| 92 | T | A | 0.0327 | |
| 93 | F | A | 0.3631 | |
| 94 | C | A | 0.0000 | |
| 95 | D | A | -0.9761 | |
| 96 | H | A | 0.0000 | |
| 97 | C | A | 0.0530 | |
| 98 | G | A | 0.0000 | |
| 99 | S | A | 0.0825 | |
| 100 | L | A | 0.5190 | |
| 101 | L | A | 0.0000 | |
| 102 | Y | A | 1.6146 | |
| 103 | G | A | 1.3198 | |
| 104 | L | A | 2.3111 | |
| 105 | I | A | 2.4776 | |
| 106 | H | A | 0.6484 | |
| 107 | Q | A | 0.7899 | |
| 108 | G | A | 0.0000 | |
| 109 | M | A | -1.0641 | |
| 110 | K | A | -1.7375 | |
| 111 | C | A | 0.0000 | |
| 112 | D | A | -3.1747 | |
| 113 | T | A | -1.9663 | |
| 114 | C | A | -1.7041 | |
| 115 | D | A | -2.6478 | |
| 116 | M | A | 0.0000 | |
| 117 | N | A | -1.1537 | |
| 118 | V | A | 0.0000 | |
| 119 | H | A | -0.4890 | |
| 120 | K | A | -1.2555 | |
| 121 | Q | A | -1.1853 | |
| 122 | C | A | 0.0000 | |
| 123 | V | A | 0.6628 | |
| 124 | I | A | 1.6133 | |
| 125 | N | A | 0.8123 | |
| 126 | V | A | 0.0000 | |
| 127 | P | A | 0.0000 | |
| 128 | S | A | -0.9493 | |
| 129 | L | A | -0.5998 | |
| 130 | C | A | -1.5622 | |
| 131 | G | A | -1.1525 | |
| 132 | M | A | -0.4755 | |
| 133 | D | A | -1.6239 | |
| 134 | H | A | -1.0295 | |
| 135 | T | A | -1.1711 | |
| 136 | E | A | 0.0000 | |
| 137 | K | A | -2.2187 | |
| 138 | R | A | -1.2443 | |
| 139 | G | A | 0.0000 | |
| 140 | R | A | -0.6340 | |
| 141 | I | A | 0.0000 | |
| 142 | Y | A | -0.5558 | |
| 143 | L | A | 0.0000 | |
| 144 | K | A | -1.2421 | |
| 145 | A | A | 0.0000 | |
| 146 | E | A | -1.3862 | |
| 147 | V | A | -1.6991 | |
| 148 | A | A | -1.7329 | |
| 149 | D | A | -3.1025 | |
| 150 | E | A | -3.8303 | |
| 151 | K | A | -3.3298 | |
| 152 | L | A | 0.0000 | |
| 153 | H | A | -1.5077 | |
| 154 | V | A | 0.0000 | |
| 155 | T | A | -1.0314 | |
| 156 | V | A | 0.0000 | |
| 157 | R | A | -1.6522 | |
| 158 | D | A | 0.0000 | |
| 159 | A | A | 0.0000 | |
| 160 | K | A | -0.8685 | |
| 161 | N | A | 0.0000 | |
| 162 | L | A | 0.0000 | |
| 163 | I | A | -0.0583 | |
| 164 | P | A | -0.1176 | |
| 165 | M | A | -0.5718 | |
| 166 | D | A | -1.4307 | |
| 167 | P | A | -1.2359 | |
| 168 | N | A | -1.6594 | |
| 169 | G | A | -0.8895 | |
| 170 | L | A | -0.5876 | |
| 171 | S | A | 0.0000 | |
| 172 | D | A | -1.3867 | |
| 173 | P | A | 0.0000 | |
| 174 | Y | A | 0.0000 | |
| 175 | V | A | 0.0000 | |
| 176 | K | A | -1.5175 | |
| 177 | L | A | 0.0000 | |
| 178 | K | A | -1.5994 | |
| 179 | L | A | 0.0000 | |
| 180 | I | A | -0.9184 | |
| 181 | P | A | -1.0828 | |
| 182 | D | A | 0.0000 | |
| 183 | P | A | -1.7814 | |
| 184 | K | A | -3.1656 | |
| 185 | N | A | -3.3767 | |
| 186 | E | A | -3.4315 | |
| 187 | S | A | -2.4460 | |
| 188 | K | A | -2.8167 | |
| 189 | Q | A | -2.0281 | |
| 190 | K | A | -2.6515 | |
| 191 | T | A | 0.0000 | |
| 192 | K | A | -2.4982 | |
| 193 | T | A | -1.3933 | |
| 194 | I | A | -1.1111 | |
| 195 | R | A | -1.7849 | |
| 196 | S | A | -1.2703 | |
| 197 | T | A | -0.6932 | |
| 198 | L | A | -0.3612 | |
| 199 | N | A | -0.8815 | |
| 200 | P | A | 0.0000 | |
| 201 | Q | A | -1.9995 | |
| 202 | W | A | 0.0000 | |
| 203 | N | A | -2.1967 | |
| 204 | E | A | -1.6723 | |
| 205 | S | A | -0.9452 | |
| 206 | F | A | -0.4544 | |
| 207 | T | A | -0.8458 | |
| 208 | F | A | 0.0000 | |
| 209 | K | A | -3.1383 | |
| 210 | L | A | 0.0000 | |
| 211 | K | A | -2.9651 | |
| 212 | P | A | -1.9828 | |
| 213 | S | A | -1.7592 | |
| 214 | D | A | 0.0000 | |
| 215 | K | A | -2.8319 | |
| 216 | D | A | -2.8412 | |
| 217 | R | A | -1.6941 | |
| 218 | R | A | -1.1959 | |
| 219 | L | A | 0.0000 | |
| 220 | S | A | 0.0000 | |
| 221 | V | A | 0.0000 | |
| 222 | E | A | 0.0000 | |
| 223 | I | A | 0.0000 | |
| 224 | W | A | 0.0000 | |
| 225 | D | A | 0.0000 | |
| 226 | W | A | -1.3472 | |
| 227 | D | A | -2.2914 | |
| 228 | R | A | -2.4528 | |
| 229 | T | A | -1.5458 | |
| 230 | T | A | -1.9228 | |
| 231 | R | A | -2.7822 | |
| 232 | N | A | -2.2369 | |
| 233 | D | A | -2.1303 | |
| 234 | F | A | -0.8757 | |
| 235 | M | A | 0.0000 | |
| 236 | G | A | 0.0000 | |
| 237 | S | A | 0.0000 | |
| 238 | L | A | 0.0000 | |
| 239 | S | A | 0.0000 | |
| 240 | F | A | 0.0000 | |
| 241 | G | A | -1.2990 | |
| 242 | V | A | 0.0000 | |
| 243 | S | A | -2.0193 | |
| 244 | E | A | -2.5527 | |
| 245 | L | A | 0.0000 | |
| 246 | M | A | -1.3474 | |
| 247 | K | A | -1.7849 | |
| 248 | M | A | -0.4118 | |
| 249 | P | A | -0.7820 | |
| 250 | A | A | 0.0000 | |
| 251 | S | A | -0.5383 | |
| 252 | G | A | 0.0000 | |
| 253 | W | A | -0.4245 | |
| 254 | Y | A | 0.0000 | |
| 255 | K | A | -0.4322 | |
| 256 | L | A | 0.0000 | |
| 257 | L | A | 0.0000 | |
| 258 | N | A | -2.0701 | |
| 259 | Q | A | -2.2679 | |
| 260 | E | A | -2.7309 | |
| 261 | E | A | -1.7911 | |
| 262 | G | A | 0.0000 | |
| 263 | E | A | -1.5076 | |
| 264 | Y | A | 0.2677 | |
| 265 | Y | A | 0.5676 | |
| 266 | N | A | 0.2836 | |
| 267 | V | A | 0.5421 | |
| 268 | P | A | -0.0845 | |
| 269 | I | A | 0.0000 | |
| 270 | P | A | -1.6841 | |
| 271 | E | A | -3.2032 | |
| 272 | G | A | -3.2035 | |
| 273 | D | A | -4.1583 | |
| 274 | E | A | -4.0126 | |
| 275 | E | A | -3.7613 | |
| 276 | G | A | -3.0752 | |
| 277 | N | A | -2.5875 | |
| 278 | M | A | -1.5675 | |
| 279 | E | A | -2.5855 | |
| 280 | L | A | -1.9400 | |
| 281 | R | A | -2.2998 | |
| 282 | Q | A | -2.9609 | |
| 283 | K | A | -3.2212 | |
| 284 | F | A | -1.7039 | |
| 285 | E | A | -2.4547 | |
| 286 | K | A | -2.7948 | |
| 287 | A | A | -1.7059 | |
| 288 | K | A | -1.8387 | |
| 289 | L | A | -0.1006 | |
| 290 | G | A | -0.7198 |