| Chain sequence(s) |
A: SNECIRKWLSCVDRKNDCCEGLECYKRRHSFEVCVPIPGFCLVKWKQCDGRERDCCAGLECWKRSGNKSSVCAPIT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:59)
[INFO] Main: Simulation completed successfully. (00:01:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -1.2313 | |
| 2 | N | A | -2.1125 | |
| 3 | E | A | -2.4926 | |
| 4 | C | A | -1.5408 | |
| 5 | I | A | -1.6362 | |
| 6 | R | A | -1.6754 | |
| 7 | K | A | -1.1366 | |
| 8 | W | A | 0.6034 | |
| 9 | L | A | 0.8809 | |
| 10 | S | A | 0.0983 | |
| 11 | C | A | 0.0000 | |
| 12 | V | A | 0.4774 | |
| 13 | D | A | -2.4940 | |
| 14 | R | A | -3.8787 | |
| 15 | K | A | -3.7807 | |
| 16 | N | A | -3.8328 | |
| 17 | D | A | -3.9050 | |
| 18 | C | A | 0.0000 | |
| 19 | C | A | -1.7758 | |
| 20 | E | A | -0.6013 | |
| 21 | G | A | -0.2210 | |
| 22 | L | A | -0.9278 | |
| 23 | E | A | -1.4160 | |
| 24 | C | A | -1.1463 | |
| 25 | Y | A | 0.0524 | |
| 26 | K | A | -2.1258 | |
| 27 | R | A | -2.8292 | |
| 28 | R | A | -3.1836 | |
| 29 | H | A | -2.1659 | |
| 30 | S | A | -0.9858 | |
| 31 | F | A | 1.0285 | |
| 32 | E | A | 0.0778 | |
| 33 | V | A | 0.0000 | |
| 34 | C | A | 0.0000 | |
| 35 | V | A | 0.0000 | |
| 36 | P | A | 0.0096 | |
| 37 | I | A | 0.4172 | |
| 38 | P | A | 0.0020 | |
| 39 | G | A | -0.1928 | |
| 40 | F | A | 0.3550 | |
| 41 | C | A | 0.1619 | |
| 42 | L | A | 0.0000 | |
| 43 | V | A | 0.5767 | |
| 44 | K | A | 0.1363 | |
| 45 | W | A | 0.7842 | |
| 46 | K | A | -0.2581 | |
| 47 | Q | A | -1.2771 | |
| 48 | C | A | 0.0000 | |
| 49 | D | A | -2.3672 | |
| 50 | G | A | -2.0079 | |
| 51 | R | A | -2.8316 | |
| 52 | E | A | -2.9964 | |
| 53 | R | A | -3.2436 | |
| 54 | D | A | -2.3086 | |
| 55 | C | A | -1.2116 | |
| 56 | C | A | 0.0406 | |
| 57 | A | A | 0.0518 | |
| 58 | G | A | 0.2120 | |
| 59 | L | A | -0.4109 | |
| 60 | E | A | -1.9701 | |
| 61 | C | A | -2.3056 | |
| 62 | W | A | -1.1882 | |
| 63 | K | A | -2.6695 | |
| 64 | R | A | -2.9308 | |
| 65 | S | A | -2.3200 | |
| 66 | G | A | -1.9608 | |
| 67 | N | A | -2.6725 | |
| 68 | K | A | -3.0499 | |
| 69 | S | A | -2.2463 | |
| 70 | S | A | -2.0227 | |
| 71 | V | A | 0.0000 | |
| 72 | C | A | 0.0000 | |
| 73 | A | A | -0.1074 | |
| 74 | P | A | 0.6238 | |
| 75 | I | A | 1.4862 | |
| 76 | T | A | 0.6612 |