| Chain sequence(s) |
A: ASCNGVCSPFEMPPCGTSACRCIPVGLVIGYCRNPSG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:09)
[INFO] Main: Simulation completed successfully. (00:00:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.2144 | |
| 2 | S | A | -0.8057 | |
| 3 | C | A | -1.1764 | |
| 4 | N | A | -1.4723 | |
| 5 | G | A | 0.0033 | |
| 6 | V | A | 2.1221 | |
| 7 | C | A | 0.0000 | |
| 8 | S | A | 2.4520 | |
| 9 | P | A | 2.0200 | |
| 10 | F | A | 2.1642 | |
| 11 | E | A | 0.2586 | |
| 12 | M | A | 0.3805 | |
| 13 | P | A | -0.1279 | |
| 14 | P | A | 0.0000 | |
| 15 | C | A | -0.1852 | |
| 16 | G | A | -0.3622 | |
| 17 | T | A | -0.3463 | |
| 18 | S | A | -0.4730 | |
| 19 | A | A | -0.6993 | |
| 20 | C | A | 0.0000 | |
| 21 | R | A | -2.0973 | |
| 22 | C | A | -0.1198 | |
| 23 | I | A | 0.7697 | |
| 24 | P | A | 2.2383 | |
| 25 | V | A | 3.0025 | |
| 26 | G | A | 2.7302 | |
| 27 | L | A | 3.3525 | |
| 28 | V | A | 3.7927 | |
| 29 | I | A | 4.0786 | |
| 30 | G | A | 0.0000 | |
| 31 | Y | A | 1.2366 | |
| 32 | C | A | 0.0000 | |
| 33 | R | A | -1.8289 | |
| 34 | N | A | -1.7854 | |
| 35 | P | A | -1.2543 | |
| 36 | S | A | -0.8018 | |
| 37 | G | A | -0.8821 |