Project name: query_structure

Status: done

Started: 2026-03-16 22:54:47
Settings
Chain sequence(s) A: ASCNGVCSPFEMPPCGTSACRCIPVGLVIGYCRNPSG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:09)
Show buried residues

Minimal score value
-2.0973
Maximal score value
4.0786
Average score
0.4316
Total score value
15.9695

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.2144
2 S A -0.8057
3 C A -1.1764
4 N A -1.4723
5 G A 0.0033
6 V A 2.1221
7 C A 0.0000
8 S A 2.4520
9 P A 2.0200
10 F A 2.1642
11 E A 0.2586
12 M A 0.3805
13 P A -0.1279
14 P A 0.0000
15 C A -0.1852
16 G A -0.3622
17 T A -0.3463
18 S A -0.4730
19 A A -0.6993
20 C A 0.0000
21 R A -2.0973
22 C A -0.1198
23 I A 0.7697
24 P A 2.2383
25 V A 3.0025
26 G A 2.7302
27 L A 3.3525
28 V A 3.7927
29 I A 4.0786
30 G A 0.0000
31 Y A 1.2366
32 C A 0.0000
33 R A -1.8289
34 N A -1.7854
35 P A -1.2543
36 S A -0.8018
37 G A -0.8821
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Laboratory of Theory of Biopolymers 2018