Project name: query_structure

Status: done

Started: 2026-03-16 23:06:47
Settings
Chain sequence(s) A: EDKCSPSGAICSGFGPPEQCCSGACVLNRRARSWRCQ
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:16)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:16)
Show buried residues

Minimal score value
-3.3678
Maximal score value
1.7318
Average score
-0.8975
Total score value
-33.2085

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -3.1231
2 D A -3.3463
3 K A -3.2619
4 C A -2.0430
5 S A -0.8900
6 P A -0.6548
7 S A -0.4666
8 G A -0.1908
9 A A 0.5044
10 I A 1.6659
11 C A 0.0000
12 S A 0.8062
13 G A 1.1053
14 F A 1.7318
15 G A 0.0917
16 P A -0.8894
17 P A -1.1348
18 E A -2.4724
19 Q A -1.6655
20 C A 0.0000
21 C A -0.7827
22 S A -0.7515
23 G A -1.1437
24 A A -0.7480
25 C A 0.1377
26 V A 0.3267
27 L A -0.4860
28 N A -1.9570
29 R A -3.3678
30 R A -3.3664
31 A A -2.1311
32 R A -3.0587
33 S A -1.0110
34 W A 0.4530
35 R A -0.1237
36 C A 0.0000
37 Q A -0.9650
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Laboratory of Theory of Biopolymers 2018