| Chain sequence(s) |
A: TIDQWLLKNAKEDAIAELKKAGITSDFYFNAINKAKTVEEVNALKNEILKAHA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:03)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:03)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:03)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:03)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:03)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:50)
[INFO] Main: Simulation completed successfully. (00:01:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | T | A | 0.2566 | |
| 2 | I | A | 1.2275 | |
| 3 | D | A | -0.6289 | |
| 4 | Q | A | -0.8293 | |
| 5 | W | A | 0.6345 | |
| 6 | L | A | 0.4781 | |
| 7 | L | A | -1.2455 | |
| 8 | K | A | -2.7136 | |
| 9 | N | A | -2.5363 | |
| 10 | A | A | 0.0000 | |
| 11 | K | A | -3.1013 | |
| 12 | E | A | -3.8135 | |
| 13 | D | A | -3.7283 | |
| 14 | A | A | 0.0000 | |
| 15 | I | A | 0.0000 | |
| 16 | A | A | -2.8794 | |
| 17 | E | A | -3.4853 | |
| 18 | L | A | 0.0000 | |
| 19 | K | A | -3.1790 | |
| 20 | K | A | -3.1459 | |
| 21 | A | A | -1.9012 | |
| 22 | G | A | -1.6328 | |
| 23 | I | A | -1.0859 | |
| 24 | T | A | -0.8692 | |
| 25 | S | A | -0.6634 | |
| 26 | D | A | -1.0050 | |
| 27 | F | A | 0.8344 | |
| 28 | Y | A | -0.1363 | |
| 29 | F | A | -0.7386 | |
| 30 | N | A | -1.4110 | |
| 31 | A | A | -0.9160 | |
| 32 | I | A | 0.0000 | |
| 33 | N | A | -2.2549 | |
| 34 | K | A | -2.5335 | |
| 35 | A | A | -2.3201 | |
| 36 | K | A | -2.2746 | |
| 37 | T | A | -1.4911 | |
| 38 | V | A | -1.1078 | |
| 39 | E | A | -2.1929 | |
| 40 | E | A | -2.3334 | |
| 41 | V | A | 0.0000 | |
| 42 | N | A | -1.8965 | |
| 43 | A | A | -1.5734 | |
| 44 | L | A | -0.7789 | |
| 45 | K | A | -1.1829 | |
| 46 | N | A | -1.7799 | |
| 47 | E | A | -1.7786 | |
| 48 | I | A | 0.0000 | |
| 49 | L | A | -0.1697 | |
| 50 | K | A | -1.7919 | |
| 51 | A | A | -1.2712 | |
| 52 | H | A | -0.9772 | |
| 53 | A | A | -0.5205 |