| Chain sequence(s) |
A: QVQLQQSGPELVKPGASVRMSCKTSGYTFTDYVISWVKQRPGQGLEWIGEIFPRTGSTYYNENFKATATLTADKSSNTAYMQLSSLTSEDSAAYFCAFITSVDWAMEYWGQGTSVTVSS
C: RLLEMEFEERKRAAE input PDB |
| Selected Chain(s) | A,C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:19)
[INFO] Main: Simulation completed successfully. (00:01:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.2832 | |
| 2 | V | A | -0.7410 | |
| 3 | Q | A | -1.0062 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.6998 | |
| 6 | Q | A | -1.2693 | |
| 7 | S | A | -1.1992 | |
| 8 | G | A | -0.8390 | |
| 9 | P | A | -0.6001 | |
| 10 | E | A | -0.5313 | |
| 11 | L | A | 0.6979 | |
| 12 | V | A | -0.4535 | |
| 13 | K | A | -1.8162 | |
| 14 | P | A | -1.7484 | |
| 15 | G | A | -1.0231 | |
| 16 | A | A | -0.7509 | |
| 17 | S | A | -1.0312 | |
| 18 | V | A | 0.0000 | |
| 19 | R | A | -2.0622 | |
| 20 | M | A | 0.0000 | |
| 21 | S | A | -0.7284 | |
| 22 | C | A | 0.0000 | |
| 23 | K | A | -1.5597 | |
| 24 | T | A | 0.0000 | |
| 25 | S | A | -1.0843 | |
| 26 | G | A | -0.8464 | |
| 27 | Y | A | -0.4526 | |
| 28 | T | A | -0.5326 | |
| 29 | F | A | 0.0000 | |
| 30 | T | A | -1.2366 | |
| 31 | D | A | -0.8126 | |
| 32 | Y | A | -0.1051 | |
| 33 | V | A | 0.0000 | |
| 34 | I | A | 0.0000 | |
| 35 | S | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | V | A | 0.0000 | |
| 38 | K | A | -0.2850 | |
| 39 | Q | A | -0.8873 | |
| 40 | R | A | -1.6608 | |
| 41 | P | A | -1.3921 | |
| 42 | G | A | -1.3995 | |
| 43 | Q | A | -1.8010 | |
| 44 | G | A | -0.8746 | |
| 45 | L | A | 0.1744 | |
| 46 | E | A | -0.1717 | |
| 47 | W | A | 0.0206 | |
| 48 | I | A | 0.0000 | |
| 49 | G | A | 0.0000 | |
| 50 | E | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | F | A | 0.0000 | |
| 53 | P | A | 0.0000 | |
| 54 | R | A | -1.4088 | |
| 55 | T | A | -0.7765 | |
| 56 | G | A | -0.8356 | |
| 57 | S | A | -0.5896 | |
| 58 | T | A | -0.1810 | |
| 59 | Y | A | -0.6959 | |
| 60 | Y | A | -1.0901 | |
| 61 | N | A | -1.5291 | |
| 62 | E | A | -2.9970 | |
| 63 | N | A | -2.4132 | |
| 64 | F | A | -1.6000 | |
| 65 | K | A | -2.5087 | |
| 66 | A | A | -1.1580 | |
| 67 | T | A | -0.7055 | |
| 68 | A | A | 0.0000 | |
| 69 | T | A | -0.5236 | |
| 70 | L | A | 0.0000 | |
| 71 | T | A | -0.3879 | |
| 72 | A | A | -1.0628 | |
| 73 | D | A | -1.8004 | |
| 74 | K | A | -2.4895 | |
| 75 | S | A | -1.5075 | |
| 76 | S | A | -1.3821 | |
| 77 | N | A | -1.7695 | |
| 78 | T | A | 0.0000 | |
| 79 | A | A | 0.0000 | |
| 80 | Y | A | -0.2842 | |
| 81 | M | A | 0.0000 | |
| 82 | Q | A | -1.1209 | |
| 83 | L | A | 0.0000 | |
| 84 | S | A | -0.5803 | |
| 85 | S | A | -0.5815 | |
| 86 | L | A | -0.8762 | |
| 87 | T | A | -1.2254 | |
| 88 | S | A | -1.9082 | |
| 89 | E | A | -3.1705 | |
| 90 | D | A | -2.8635 | |
| 91 | S | A | -1.4371 | |
| 92 | A | A | -0.8980 | |
| 93 | A | A | -0.5231 | |
| 94 | Y | A | 0.0000 | |
| 95 | F | A | 0.0384 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | F | A | 0.0000 | |
| 99 | I | A | 0.0000 | |
| 100 | T | A | -0.1909 | |
| 101 | S | A | 0.0006 | |
| 102 | V | A | 0.7743 | |
| 103 | D | A | -0.9505 | |
| 104 | W | A | -0.4124 | |
| 105 | A | A | -0.3728 | |
| 106 | M | A | -0.1122 | |
| 107 | E | A | -1.1895 | |
| 108 | Y | A | -0.2078 | |
| 109 | W | A | -0.0662 | |
| 110 | G | A | -0.7442 | |
| 111 | Q | A | -1.3001 | |
| 112 | G | A | -0.8803 | |
| 113 | T | A | 0.0000 | |
| 114 | S | A | -0.5424 | |
| 115 | V | A | 0.0000 | |
| 116 | T | A | -0.9057 | |
| 117 | V | A | 0.0000 | |
| 118 | S | A | -1.4976 | |
| 119 | S | A | -1.0431 | |
| 1 | R | C | -1.0148 | |
| 2 | L | C | 0.9571 | |
| 3 | L | C | 0.2933 | |
| 4 | E | C | -0.2301 | |
| 5 | M | C | -0.4725 | |
| 6 | E | C | -1.3103 | |
| 7 | F | C | 0.0000 | |
| 8 | E | C | -2.2131 | |
| 9 | E | C | -3.4676 | |
| 10 | R | C | -2.5916 | |
| 11 | K | C | -2.6101 | |
| 12 | R | C | -3.3288 | |
| 13 | A | C | -1.6807 | |
| 14 | A | C | -1.9897 | |
| 15 | E | C | -2.4861 |