Chain sequence(s) |
A: AIITVTPKSFGSPGSLGKLLCEVTPVSGQERFVWSSLDTPSQRSFSGPWLEAQEAQLLSQPWQCQLYQGERLLGAAVYF
H: QVQLQQWGAGLLKPSETLSLTCAVYGGSFSDYYWNWIRQPPGKGLEWIGEINHNGNTNSNPSLKSRVTLSLDTSKNQFSLKLRSVTAADTAVYYCAFGYSDYEYNWFDPWGQGTLVTVS L: EIVLTQSPATLSLSPGERATLSCRASQSISSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPLTFGQGTNLE input PDB |
Selected Chain(s) | A,H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:09) [INFO] Main: Simulation completed successfully. (00:02:11) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | A | A | 1.2105 | |
2 | I | A | 2.0369 | |
3 | I | A | 1.0521 | |
4 | T | A | 0.3766 | |
5 | V | A | 0.3415 | |
6 | T | A | -0.3163 | |
7 | P | A | -0.6771 | |
8 | K | A | -1.2355 | |
9 | S | A | -0.8165 | |
10 | F | A | -0.4717 | |
11 | G | A | -0.3119 | |
12 | S | A | -0.2485 | |
13 | P | A | -0.3539 | |
14 | G | A | -0.5360 | |
15 | S | A | -0.7825 | |
16 | L | A | -0.2280 | |
17 | G | A | -1.0883 | |
18 | K | A | -1.3950 | |
19 | L | A | 0.0000 | |
20 | L | A | -0.2379 | |
21 | C | A | 0.0000 | |
22 | E | A | -0.2540 | |
23 | V | A | 0.0000 | |
24 | T | A | 0.6427 | |
25 | P | A | 0.6433 | |
26 | V | A | 0.9446 | |
27 | S | A | -0.0928 | |
28 | G | A | -0.8598 | |
29 | Q | A | -1.4740 | |
30 | E | A | -1.1158 | |
31 | R | A | -1.2481 | |
32 | F | A | -0.2253 | |
33 | V | A | 0.2655 | |
34 | W | A | 0.0000 | |
35 | S | A | -0.1979 | |
36 | S | A | -0.5314 | |
37 | L | A | -0.2115 | |
38 | D | A | -1.6287 | |
39 | T | A | -0.8494 | |
40 | P | A | -0.7536 | |
41 | S | A | -0.5622 | |
42 | Q | A | -0.6115 | |
43 | R | A | 0.0000 | |
44 | S | A | -0.1133 | |
45 | F | A | 0.2301 | |
46 | S | A | -0.2824 | |
47 | G | A | 0.0691 | |
48 | P | A | 0.2205 | |
49 | W | A | 0.3464 | |
50 | L | A | 0.0000 | |
51 | E | A | -1.9031 | |
52 | A | A | -1.3432 | |
53 | Q | A | -1.5560 | |
54 | E | A | -1.8197 | |
55 | A | A | -0.7302 | |
56 | Q | A | 0.0200 | |
57 | L | A | 1.5809 | |
58 | L | A | 1.3777 | |
59 | S | A | 0.2297 | |
60 | Q | A | -0.1318 | |
61 | P | A | 0.2925 | |
62 | W | A | 0.0000 | |
63 | Q | A | 0.2316 | |
64 | C | A | 0.0000 | |
65 | Q | A | 0.0000 | |
66 | L | A | 0.0000 | |
67 | Y | A | -0.6955 | |
68 | Q | A | -1.2965 | |
69 | G | A | -1.7777 | |
70 | E | A | -2.7431 | |
71 | R | A | -2.2057 | |
72 | L | A | 0.0315 | |
73 | L | A | 0.8249 | |
74 | G | A | 0.9087 | |
75 | A | A | 0.8351 | |
76 | A | A | 0.6467 | |
77 | V | A | 1.1800 | |
78 | Y | A | 1.4866 | |
79 | F | A | 2.1892 | |
80 | Q | H | -1.4349 | |
81 | V | H | -0.8500 | |
82 | Q | H | -1.3267 | |
83 | L | H | 0.0000 | |
84 | Q | H | -0.6945 | |
85 | Q | H | 0.0000 | |
86 | W | H | 0.2290 | |
87 | G | H | 0.0753 | |
88 | A | H | 0.6898 | |
89 | G | H | 0.0000 | |
90 | L | H | 1.5540 | |
91 | L | H | -0.3288 | |
92 | K | H | -1.9873 | |
93 | P | H | -1.6135 | |
94 | S | H | -1.8123 | |
95 | E | H | -2.7229 | |
96 | T | H | -1.9836 | |
97 | L | H | 0.0000 | |
98 | S | H | -0.9385 | |
99 | L | H | 0.0000 | |
100 | T | H | -0.1757 | |
101 | C | H | 0.0000 | |
102 | A | H | 0.0000 | |
103 | V | H | -0.0983 | |
104 | Y | H | 0.2632 | |
105 | G | H | -0.6851 | |
106 | G | H | -0.8561 | |
107 | S | H | -0.0747 | |
108 | F | H | 0.2645 | |
109 | S | H | -0.0683 | |
110 | D | H | -0.1582 | |
111 | Y | H | 0.2387 | |
112 | Y | H | 0.1775 | |
113 | W | H | 0.0000 | |
114 | N | H | -0.0496 | |
115 | W | H | 0.0000 | |
116 | I | H | 0.0000 | |
117 | R | H | 0.0000 | |
118 | Q | H | -0.6092 | |
119 | P | H | -0.8111 | |
120 | P | H | -0.8672 | |
121 | G | H | -1.5188 | |
122 | K | H | -2.4752 | |
123 | G | H | -1.9046 | |
124 | L | H | 0.0000 | |
125 | E | H | -0.8650 | |
126 | W | H | 0.0000 | |
127 | I | H | 0.0000 | |
128 | G | H | 0.0000 | |
129 | E | H | 0.0000 | |
130 | I | H | 0.1404 | |
131 | N | H | 0.0000 | |
132 | H | H | -0.2266 | |
133 | N | H | -0.1688 | |
134 | G | H | -0.5042 | |
135 | N | H | -0.8007 | |
136 | T | H | -0.4118 | |
137 | N | H | -0.7669 | |
138 | S | H | -0.9125 | |
139 | N | H | -1.2001 | |
140 | P | H | -1.2465 | |
141 | S | H | -0.8762 | |
142 | L | H | 0.0000 | |
143 | K | H | -2.0565 | |
144 | S | H | -1.3963 | |
145 | R | H | -1.5443 | |
146 | V | H | -1.3107 | |
147 | T | H | -0.9082 | |
148 | L | H | -0.2738 | |
149 | S | H | -0.2227 | |
150 | L | H | -0.6802 | |
151 | D | H | -1.6948 | |
152 | T | H | -1.4551 | |
153 | S | H | -1.6309 | |
154 | K | H | -2.6644 | |
155 | N | H | -2.4071 | |
156 | Q | H | -1.5413 | |
157 | F | H | 0.0000 | |
158 | S | H | -0.4732 | |
159 | L | H | 0.0000 | |
160 | K | H | -1.2210 | |
161 | L | H | 0.0000 | |
162 | R | H | -2.1672 | |
163 | S | H | -1.8193 | |
164 | V | H | 0.0000 | |
165 | T | H | -0.7295 | |
166 | A | H | -0.1957 | |
167 | A | H | 0.0671 | |
168 | D | H | 0.0000 | |
169 | T | H | 0.4994 | |
170 | A | H | 0.0000 | |
171 | V | H | 0.9532 | |
172 | Y | H | 0.0000 | |
173 | Y | H | 0.0000 | |
174 | C | H | 0.0000 | |
175 | A | H | 0.0000 | |
176 | F | H | 0.0000 | |
177 | G | H | 0.0000 | |
178 | Y | H | 0.2782 | |
179 | S | H | -0.2916 | |
180 | D | H | -0.9096 | |
181 | Y | H | 0.1288 | |
182 | E | H | -1.2246 | |
183 | Y | H | -0.0667 | |
184 | N | H | -1.1652 | |
185 | W | H | -0.5026 | |
186 | F | H | 0.0146 | |
187 | D | H | 0.0000 | |
188 | P | H | 0.0000 | |
189 | W | H | -0.5727 | |
190 | G | H | 0.0000 | |
191 | Q | H | -1.5352 | |
192 | G | H | -0.3705 | |
193 | T | H | 0.8417 | |
194 | L | H | 1.9602 | |
195 | V | H | 0.0000 | |
196 | T | H | 0.7251 | |
197 | V | H | 0.0000 | |
198 | S | H | -0.4850 | |
199 | E | L | -1.5065 | |
200 | I | L | 0.0000 | |
201 | V | L | 0.9018 | |
202 | L | L | 0.0000 | |
203 | T | L | -0.7194 | |
204 | Q | L | 0.0000 | |
205 | S | L | -0.6968 | |
206 | P | L | -0.3896 | |
207 | A | L | -0.2924 | |
208 | T | L | -0.4332 | |
209 | L | L | -0.2534 | |
210 | S | L | -0.7417 | |
211 | L | L | -0.8362 | |
212 | S | L | -1.2539 | |
213 | P | L | -1.8779 | |
214 | G | L | -1.8857 | |
215 | E | L | -2.4276 | |
216 | R | L | -2.5610 | |
217 | A | L | 0.0000 | |
218 | T | L | -0.6796 | |
219 | L | L | 0.0000 | |
220 | S | L | -0.8883 | |
221 | C | L | 0.0000 | |
222 | R | L | -2.3731 | |
223 | A | L | 0.0000 | |
224 | S | L | -0.7648 | |
225 | Q | L | -1.1191 | |
226 | S | L | -1.4276 | |
227 | I | L | 0.0000 | |
228 | S | L | -0.6725 | |
229 | S | L | -0.3864 | |
230 | Y | L | 0.2562 | |
231 | L | L | 0.0000 | |
232 | A | L | 0.0000 | |
233 | W | L | 0.0000 | |
234 | Y | L | 0.0000 | |
235 | Q | L | 0.0000 | |
236 | Q | L | -1.2740 | |
237 | K | L | -2.3466 | |
238 | P | L | -1.4031 | |
239 | G | L | -1.4708 | |
240 | Q | L | -1.7887 | |
241 | A | L | -1.1477 | |
242 | P | L | 0.0000 | |
243 | R | L | -0.9427 | |
244 | L | L | 0.0000 | |
245 | L | L | 0.0000 | |
246 | I | L | 0.0000 | |
247 | Y | L | -0.6447 | |
248 | D | L | -0.7883 | |
249 | A | L | 0.0000 | |
250 | S | L | -1.0231 | |
251 | N | L | -1.5723 | |
252 | R | L | -1.7028 | |
253 | A | L | 0.0000 | |
254 | T | L | -0.6376 | |
255 | G | L | -0.5755 | |
256 | I | L | -0.3511 | |
257 | P | L | -0.3254 | |
258 | A | L | -0.3487 | |
259 | R | L | -0.6950 | |
260 | F | L | 0.0000 | |
261 | S | L | -0.6368 | |
262 | G | L | -0.6982 | |
263 | S | L | -0.8200 | |
264 | G | L | -1.1811 | |
265 | S | L | -1.1368 | |
266 | G | L | -1.5643 | |
267 | T | L | 0.0000 | |
268 | D | L | -2.5189 | |
269 | F | L | 0.0000 | |
270 | T | L | -0.8443 | |
271 | L | L | 0.0000 | |
272 | T | L | -0.5834 | |
273 | I | L | 0.0000 | |
274 | S | L | -1.5941 | |
275 | S | L | -1.7522 | |
276 | L | L | 0.0000 | |
277 | E | L | -2.2769 | |
278 | P | L | -1.9501 | |
279 | E | L | -2.4060 | |
280 | D | L | 0.0000 | |
281 | F | L | -1.2422 | |
282 | A | L | 0.0000 | |
283 | V | L | -0.5822 | |
284 | Y | L | 0.0000 | |
285 | Y | L | 0.0000 | |
286 | C | L | 0.0000 | |
287 | Q | L | 0.0000 | |
288 | Q | L | 0.0000 | |
289 | R | L | -0.2111 | |
290 | S | L | 0.0000 | |
291 | N | L | -0.3842 | |
292 | W | L | 0.0000 | |
293 | P | L | -0.7713 | |
294 | L | L | 0.0000 | |
295 | T | L | -0.2928 | |
296 | F | L | 0.0000 | |
297 | G | L | 0.0000 | |
298 | Q | L | -1.5672 | |
299 | G | L | -0.7409 | |
300 | T | L | 0.0000 | |
301 | N | L | -0.7837 | |
302 | L | L | 0.0000 | |
303 | E | L | -1.6960 |