| Chain sequence(s) |
A: NEMGMLDKTKADLAGLVWRGEQRHPAWEEWTNVDIQPARSWGTYVLIVSLFTPYMLHQLQTKIQQLVNSSVASGAQAMRDLGGGTPFFGVAGHVIALGVTSLVGATPMSLGLGVALAAFHLAIVASGLEAELTQRAHRVFFSAMVKNPMVDGDVINPFPDGETKPALYERRMSLILAIALCMGSVVLNRTAASMTEAGAVGLAALGQLVHPETETLWTMPMACGMAGLVRGSFWGLLPMGHRLWLRTTGTRR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:34)
[INFO] Main: Simulation completed successfully. (00:02:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | N | A | -1.6413 | |
| 2 | E | A | -1.7586 | |
| 3 | M | A | -0.2360 | |
| 4 | G | A | -0.7433 | |
| 5 | M | A | -0.2708 | |
| 6 | L | A | -1.0999 | |
| 7 | D | A | -2.5686 | |
| 8 | K | A | -2.7142 | |
| 9 | T | A | -1.9300 | |
| 10 | K | A | -2.3954 | |
| 11 | A | A | -1.6466 | |
| 12 | D | A | -1.4566 | |
| 13 | L | A | 0.6436 | |
| 14 | A | A | 0.6465 | |
| 15 | G | A | 0.6049 | |
| 16 | L | A | 1.9288 | |
| 17 | V | A | 2.5663 | |
| 18 | W | A | 1.0868 | |
| 19 | R | A | -1.0633 | |
| 20 | G | A | -1.9079 | |
| 21 | E | A | -3.7683 | |
| 22 | Q | A | -3.6111 | |
| 23 | R | A | -3.6401 | |
| 24 | H | A | -2.8092 | |
| 25 | P | A | -1.2904 | |
| 26 | A | A | -0.4876 | |
| 27 | W | A | 0.3603 | |
| 28 | E | A | -1.2916 | |
| 29 | E | A | -1.6650 | |
| 30 | W | A | 0.2988 | |
| 31 | T | A | -0.2154 | |
| 32 | N | A | -1.4224 | |
| 33 | V | A | -0.2409 | |
| 34 | D | A | -0.5365 | |
| 35 | I | A | 0.0000 | |
| 36 | Q | A | 0.0000 | |
| 37 | P | A | 0.0000 | |
| 38 | A | A | 0.0000 | |
| 39 | R | A | 0.3321 | |
| 40 | S | A | 0.0000 | |
| 41 | W | A | 0.0000 | |
| 42 | G | A | 0.0000 | |
| 43 | T | A | 0.0000 | |
| 44 | Y | A | 0.0000 | |
| 45 | V | A | 1.0699 | |
| 46 | L | A | 1.6463 | |
| 47 | I | A | 1.6339 | |
| 48 | V | A | 1.3482 | |
| 49 | S | A | 1.2326 | |
| 50 | L | A | 1.7389 | |
| 51 | F | A | 1.7501 | |
| 52 | T | A | 0.9196 | |
| 53 | P | A | 0.9890 | |
| 54 | Y | A | 1.1698 | |
| 55 | M | A | 0.4568 | |
| 56 | L | A | -0.0842 | |
| 57 | H | A | -0.8224 | |
| 58 | Q | A | -1.4410 | |
| 59 | L | A | -1.2393 | |
| 60 | Q | A | -1.6191 | |
| 61 | T | A | -1.7592 | |
| 62 | K | A | -1.9901 | |
| 63 | I | A | 0.0000 | |
| 64 | Q | A | -1.6195 | |
| 65 | Q | A | -1.5294 | |
| 66 | L | A | -0.2993 | |
| 67 | V | A | 0.0000 | |
| 68 | N | A | -0.4587 | |
| 69 | S | A | -0.7748 | |
| 70 | S | A | 0.1421 | |
| 71 | V | A | 1.0584 | |
| 72 | A | A | -0.2260 | |
| 73 | S | A | -0.5566 | |
| 74 | G | A | -0.8456 | |
| 75 | A | A | -1.2473 | |
| 76 | Q | A | -1.9977 | |
| 77 | A | A | -1.3262 | |
| 78 | M | A | -1.2961 | |
| 79 | R | A | -2.8045 | |
| 80 | D | A | -2.2570 | |
| 81 | L | A | -0.2356 | |
| 82 | G | A | -1.1564 | |
| 83 | G | A | -1.3117 | |
| 84 | G | A | -0.4224 | |
| 85 | T | A | 0.0975 | |
| 86 | P | A | 0.9268 | |
| 87 | F | A | 2.2826 | |
| 88 | F | A | 1.9130 | |
| 89 | G | A | 0.6453 | |
| 90 | V | A | 0.6667 | |
| 91 | A | A | 0.2538 | |
| 92 | G | A | -0.0296 | |
| 93 | H | A | 0.1359 | |
| 94 | V | A | 0.0000 | |
| 95 | I | A | 1.5449 | |
| 96 | A | A | 0.0000 | |
| 97 | L | A | 0.0000 | |
| 98 | G | A | 0.0000 | |
| 99 | V | A | 2.1305 | |
| 100 | T | A | 0.0000 | |
| 101 | S | A | 0.0000 | |
| 102 | L | A | 1.6522 | |
| 103 | V | A | 1.6720 | |
| 104 | G | A | 0.7657 | |
| 105 | A | A | 0.7111 | |
| 106 | T | A | 0.2869 | |
| 107 | P | A | 0.1248 | |
| 108 | M | A | 0.7353 | |
| 109 | S | A | 0.0000 | |
| 110 | L | A | 1.0692 | |
| 111 | G | A | 0.7502 | |
| 112 | L | A | 0.9867 | |
| 113 | G | A | 0.0000 | |
| 114 | V | A | 2.3717 | |
| 115 | A | A | 1.5283 | |
| 116 | L | A | 1.6288 | |
| 117 | A | A | 0.0000 | |
| 118 | A | A | 1.8195 | |
| 119 | F | A | 2.3342 | |
| 120 | H | A | 0.0000 | |
| 121 | L | A | 1.1753 | |
| 122 | A | A | 0.9837 | |
| 123 | I | A | 0.8724 | |
| 124 | V | A | 0.0000 | |
| 125 | A | A | -0.0030 | |
| 126 | S | A | -0.5746 | |
| 127 | G | A | -1.0208 | |
| 128 | L | A | 0.0000 | |
| 129 | E | A | -1.6034 | |
| 130 | A | A | -1.4587 | |
| 131 | E | A | -2.0586 | |
| 132 | L | A | -1.8044 | |
| 133 | T | A | -1.2929 | |
| 134 | Q | A | -1.8814 | |
| 135 | R | A | -1.8732 | |
| 136 | A | A | -0.5227 | |
| 137 | H | A | -0.5706 | |
| 138 | R | A | -0.4400 | |
| 139 | V | A | 1.3953 | |
| 140 | F | A | 1.6458 | |
| 141 | F | A | 1.4493 | |
| 142 | S | A | 1.2776 | |
| 143 | A | A | 1.1523 | |
| 144 | M | A | 1.7465 | |
| 145 | V | A | 1.0779 | |
| 146 | K | A | -0.4874 | |
| 147 | N | A | -0.2848 | |
| 148 | P | A | -0.0881 | |
| 149 | M | A | 1.0938 | |
| 150 | V | A | 1.1443 | |
| 151 | D | A | -1.1763 | |
| 152 | G | A | -1.3898 | |
| 153 | D | A | -1.8017 | |
| 154 | V | A | -0.0438 | |
| 155 | I | A | 1.6197 | |
| 156 | N | A | 0.8165 | |
| 157 | P | A | 0.2678 | |
| 158 | F | A | 0.0113 | |
| 159 | P | A | -1.4370 | |
| 160 | D | A | -2.8035 | |
| 161 | G | A | -2.5000 | |
| 162 | E | A | -2.7848 | |
| 163 | T | A | -1.8025 | |
| 164 | K | A | -1.0154 | |
| 165 | P | A | -0.6146 | |
| 166 | A | A | -0.1038 | |
| 167 | L | A | -0.0042 | |
| 168 | Y | A | -0.1659 | |
| 169 | E | A | -0.4931 | |
| 170 | R | A | -0.7980 | |
| 171 | R | A | -0.2480 | |
| 172 | M | A | 0.3091 | |
| 173 | S | A | 0.2658 | |
| 174 | L | A | 0.0000 | |
| 175 | I | A | 1.8721 | |
| 176 | L | A | 1.0883 | |
| 177 | A | A | 0.0000 | |
| 178 | I | A | 1.5821 | |
| 179 | A | A | 0.9634 | |
| 180 | L | A | 0.0000 | |
| 181 | C | A | 0.0000 | |
| 182 | M | A | 1.4296 | |
| 183 | G | A | 1.1113 | |
| 184 | S | A | 0.0000 | |
| 185 | V | A | 1.0231 | |
| 186 | V | A | 1.7870 | |
| 187 | L | A | 0.5101 | |
| 188 | N | A | 0.0000 | |
| 189 | R | A | -1.4346 | |
| 190 | T | A | -0.9635 | |
| 191 | A | A | -0.1364 | |
| 192 | A | A | -0.0826 | |
| 193 | S | A | 0.0000 | |
| 194 | M | A | 0.1881 | |
| 195 | T | A | 0.0062 | |
| 196 | E | A | 0.0000 | |
| 197 | A | A | 0.0000 | |
| 198 | G | A | 0.2845 | |
| 199 | A | A | 0.0000 | |
| 200 | V | A | 0.0000 | |
| 201 | G | A | 0.0000 | |
| 202 | L | A | 1.7760 | |
| 203 | A | A | 0.0000 | |
| 204 | A | A | 0.0000 | |
| 205 | L | A | 2.1030 | |
| 206 | G | A | 0.9962 | |
| 207 | Q | A | -0.1531 | |
| 208 | L | A | 1.0833 | |
| 209 | V | A | 1.2510 | |
| 210 | H | A | -0.8682 | |
| 211 | P | A | -1.2702 | |
| 212 | E | A | -2.3859 | |
| 213 | T | A | -1.8393 | |
| 214 | E | A | -2.0934 | |
| 215 | T | A | -0.5254 | |
| 216 | L | A | 1.1425 | |
| 217 | W | A | 0.9005 | |
| 218 | T | A | 0.0000 | |
| 219 | M | A | 0.0000 | |
| 220 | P | A | 0.0000 | |
| 221 | M | A | 0.0000 | |
| 222 | A | A | 0.0000 | |
| 223 | C | A | 0.0000 | |
| 224 | G | A | 0.0000 | |
| 225 | M | A | 1.1423 | |
| 226 | A | A | 0.0000 | |
| 227 | G | A | 0.0000 | |
| 228 | L | A | 1.7960 | |
| 229 | V | A | 1.1690 | |
| 230 | R | A | 0.3146 | |
| 231 | G | A | 0.4316 | |
| 232 | S | A | 1.5343 | |
| 233 | F | A | 2.9515 | |
| 234 | W | A | 2.7458 | |
| 235 | G | A | 0.0000 | |
| 236 | L | A | 2.7553 | |
| 237 | L | A | 2.2793 | |
| 238 | P | A | 0.0000 | |
| 239 | M | A | 1.3831 | |
| 240 | G | A | 0.9618 | |
| 241 | H | A | 0.5530 | |
| 242 | R | A | 0.5886 | |
| 243 | L | A | 1.4645 | |
| 244 | W | A | 1.2134 | |
| 245 | L | A | 0.2927 | |
| 246 | R | A | -1.0949 | |
| 247 | T | A | -0.5820 | |
| 248 | T | A | -1.0320 | |
| 249 | G | A | -1.8453 | |
| 250 | T | A | -2.1238 | |
| 251 | R | A | -3.1535 | |
| 252 | R | A | -2.8803 |