Project name: KFDV_NS4B

Status: done

Started: 2026-05-19 18:56:38
Settings
Chain sequence(s) A: NEMGMLDKTKADLAGLVWRGEQRHPAWEEWTNVDIQPARSWGTYVLIVSLFTPYMLHQLQTKIQQLVNSSVASGAQAMRDLGGGTPFFGVAGHVIALGVTSLVGATPMSLGLGVALAAFHLAIVASGLEAELTQRAHRVFFSAMVKNPMVDGDVINPFPDGETKPALYERRMSLILAIALCMGSVVLNRTAASMTEAGAVGLAALGQLVHPETETLWTMPMACGMAGLVRGSFWGLLPMGHRLWLRTTGTRR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:34)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:36)
Show buried residues

Minimal score value
-3.7683
Maximal score value
2.9515
Average score
-0.0624
Total score value
-15.7353

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 N A -1.6413
2 E A -1.7586
3 M A -0.2360
4 G A -0.7433
5 M A -0.2708
6 L A -1.0999
7 D A -2.5686
8 K A -2.7142
9 T A -1.9300
10 K A -2.3954
11 A A -1.6466
12 D A -1.4566
13 L A 0.6436
14 A A 0.6465
15 G A 0.6049
16 L A 1.9288
17 V A 2.5663
18 W A 1.0868
19 R A -1.0633
20 G A -1.9079
21 E A -3.7683
22 Q A -3.6111
23 R A -3.6401
24 H A -2.8092
25 P A -1.2904
26 A A -0.4876
27 W A 0.3603
28 E A -1.2916
29 E A -1.6650
30 W A 0.2988
31 T A -0.2154
32 N A -1.4224
33 V A -0.2409
34 D A -0.5365
35 I A 0.0000
36 Q A 0.0000
37 P A 0.0000
38 A A 0.0000
39 R A 0.3321
40 S A 0.0000
41 W A 0.0000
42 G A 0.0000
43 T A 0.0000
44 Y A 0.0000
45 V A 1.0699
46 L A 1.6463
47 I A 1.6339
48 V A 1.3482
49 S A 1.2326
50 L A 1.7389
51 F A 1.7501
52 T A 0.9196
53 P A 0.9890
54 Y A 1.1698
55 M A 0.4568
56 L A -0.0842
57 H A -0.8224
58 Q A -1.4410
59 L A -1.2393
60 Q A -1.6191
61 T A -1.7592
62 K A -1.9901
63 I A 0.0000
64 Q A -1.6195
65 Q A -1.5294
66 L A -0.2993
67 V A 0.0000
68 N A -0.4587
69 S A -0.7748
70 S A 0.1421
71 V A 1.0584
72 A A -0.2260
73 S A -0.5566
74 G A -0.8456
75 A A -1.2473
76 Q A -1.9977
77 A A -1.3262
78 M A -1.2961
79 R A -2.8045
80 D A -2.2570
81 L A -0.2356
82 G A -1.1564
83 G A -1.3117
84 G A -0.4224
85 T A 0.0975
86 P A 0.9268
87 F A 2.2826
88 F A 1.9130
89 G A 0.6453
90 V A 0.6667
91 A A 0.2538
92 G A -0.0296
93 H A 0.1359
94 V A 0.0000
95 I A 1.5449
96 A A 0.0000
97 L A 0.0000
98 G A 0.0000
99 V A 2.1305
100 T A 0.0000
101 S A 0.0000
102 L A 1.6522
103 V A 1.6720
104 G A 0.7657
105 A A 0.7111
106 T A 0.2869
107 P A 0.1248
108 M A 0.7353
109 S A 0.0000
110 L A 1.0692
111 G A 0.7502
112 L A 0.9867
113 G A 0.0000
114 V A 2.3717
115 A A 1.5283
116 L A 1.6288
117 A A 0.0000
118 A A 1.8195
119 F A 2.3342
120 H A 0.0000
121 L A 1.1753
122 A A 0.9837
123 I A 0.8724
124 V A 0.0000
125 A A -0.0030
126 S A -0.5746
127 G A -1.0208
128 L A 0.0000
129 E A -1.6034
130 A A -1.4587
131 E A -2.0586
132 L A -1.8044
133 T A -1.2929
134 Q A -1.8814
135 R A -1.8732
136 A A -0.5227
137 H A -0.5706
138 R A -0.4400
139 V A 1.3953
140 F A 1.6458
141 F A 1.4493
142 S A 1.2776
143 A A 1.1523
144 M A 1.7465
145 V A 1.0779
146 K A -0.4874
147 N A -0.2848
148 P A -0.0881
149 M A 1.0938
150 V A 1.1443
151 D A -1.1763
152 G A -1.3898
153 D A -1.8017
154 V A -0.0438
155 I A 1.6197
156 N A 0.8165
157 P A 0.2678
158 F A 0.0113
159 P A -1.4370
160 D A -2.8035
161 G A -2.5000
162 E A -2.7848
163 T A -1.8025
164 K A -1.0154
165 P A -0.6146
166 A A -0.1038
167 L A -0.0042
168 Y A -0.1659
169 E A -0.4931
170 R A -0.7980
171 R A -0.2480
172 M A 0.3091
173 S A 0.2658
174 L A 0.0000
175 I A 1.8721
176 L A 1.0883
177 A A 0.0000
178 I A 1.5821
179 A A 0.9634
180 L A 0.0000
181 C A 0.0000
182 M A 1.4296
183 G A 1.1113
184 S A 0.0000
185 V A 1.0231
186 V A 1.7870
187 L A 0.5101
188 N A 0.0000
189 R A -1.4346
190 T A -0.9635
191 A A -0.1364
192 A A -0.0826
193 S A 0.0000
194 M A 0.1881
195 T A 0.0062
196 E A 0.0000
197 A A 0.0000
198 G A 0.2845
199 A A 0.0000
200 V A 0.0000
201 G A 0.0000
202 L A 1.7760
203 A A 0.0000
204 A A 0.0000
205 L A 2.1030
206 G A 0.9962
207 Q A -0.1531
208 L A 1.0833
209 V A 1.2510
210 H A -0.8682
211 P A -1.2702
212 E A -2.3859
213 T A -1.8393
214 E A -2.0934
215 T A -0.5254
216 L A 1.1425
217 W A 0.9005
218 T A 0.0000
219 M A 0.0000
220 P A 0.0000
221 M A 0.0000
222 A A 0.0000
223 C A 0.0000
224 G A 0.0000
225 M A 1.1423
226 A A 0.0000
227 G A 0.0000
228 L A 1.7960
229 V A 1.1690
230 R A 0.3146
231 G A 0.4316
232 S A 1.5343
233 F A 2.9515
234 W A 2.7458
235 G A 0.0000
236 L A 2.7553
237 L A 2.2793
238 P A 0.0000
239 M A 1.3831
240 G A 0.9618
241 H A 0.5530
242 R A 0.5886
243 L A 1.4645
244 W A 1.2134
245 L A 0.2927
246 R A -1.0949
247 T A -0.5820
248 T A -1.0320
249 G A -1.8453
250 T A -2.1238
251 R A -3.1535
252 R A -2.8803
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Laboratory of Theory of Biopolymers 2018