| Chain sequence(s) |
A: EAVREVCSEQAETGPCIAFFPRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:09)
[INFO] Main: Simulation completed successfully. (00:01:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.4410 | |
| 2 | A | A | -1.4964 | |
| 3 | V | A | -1.1273 | |
| 4 | R | A | -2.9867 | |
| 5 | E | A | -3.4212 | |
| 6 | V | A | 0.0000 | |
| 7 | C | A | 0.0000 | |
| 8 | S | A | -1.7058 | |
| 9 | E | A | -3.1773 | |
| 10 | Q | A | -2.4184 | |
| 11 | A | A | -1.8755 | |
| 12 | E | A | -2.1938 | |
| 13 | T | A | 0.0341 | |
| 14 | G | A | -0.3528 | |
| 15 | P | A | 0.0573 | |
| 16 | C | A | 1.3190 | |
| 17 | I | A | 2.9123 | |
| 18 | A | A | 2.5123 | |
| 19 | F | A | 3.4018 | |
| 20 | F | A | 2.3809 | |
| 21 | P | A | 0.7954 | |
| 22 | R | A | -0.3417 | |
| 23 | W | A | -0.8513 | |
| 24 | Y | A | -1.0972 | |
| 25 | F | A | 0.0000 | |
| 26 | D | A | -0.9991 | |
| 27 | V | A | 0.1430 | |
| 28 | T | A | -0.5443 | |
| 29 | E | A | -1.9919 | |
| 30 | G | A | -1.3227 | |
| 31 | K | A | -2.1651 | |
| 32 | C | A | -1.3403 | |
| 33 | A | A | -0.7751 | |
| 34 | P | A | -0.5210 | |
| 35 | F | A | 0.9224 | |
| 36 | F | A | 2.3794 | |
| 37 | Y | A | 1.3500 | |
| 38 | G | A | 0.0000 | |
| 39 | G | A | 1.1310 | |
| 40 | C | A | -0.0166 | |
| 41 | G | A | -1.0911 | |
| 42 | G | A | -1.8472 | |
| 43 | N | A | -2.3898 | |
| 44 | R | A | -2.9012 | |
| 45 | N | A | 0.0000 | |
| 46 | N | A | -1.7481 | |
| 47 | F | A | 0.0000 | |
| 48 | D | A | -2.2032 | |
| 49 | T | A | -1.8984 | |
| 50 | E | A | -2.3542 | |
| 51 | E | A | -2.0410 | |
| 52 | Y | A | -0.4901 | |
| 53 | C | A | 0.0000 | |
| 54 | M | A | -0.5866 | |
| 55 | A | A | -0.0410 | |
| 56 | V | A | 0.2851 | |
| 57 | C | A | 0.0000 | |
| 58 | G | A | -0.4012 | |
| 59 | S | A | -0.2935 | |
| 60 | A | A | -0.5765 |