| Chain sequence(s) |
A: DHYNCVSSGGQCLYSACPIFTKIQGTCYRGKAKCCK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | SY15A,YH14A,CY17A,AV16A,QR11A,GV10A,LR13A,CY12A,IV19A,PS18A,DH1A,YS3A,HY2A,CY5A,ST7A,VL6A,GE9A,SR8A,KE31A,GV30A,FV20A,TS21A,KR22A,IV23A,QR24A,GS25A,TS26A,CY27A,YH28A,RL29A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 37.5615 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:01:11)
[INFO] FoldX: Starting FoldX energy minimalization (01:25:40)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (01:26:22)
[INFO] Main: Simulation completed successfully. (01:26:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | H | A | -3.5341 | mutated: DH1A |
| 2 | R | A | -4.5867 | mutated: HY2A |
| 3 | S | A | -3.2431 | mutated: YS3A |
| 4 | N | A | -3.7766 | |
| 5 | S | A | 0.0000 | mutated: CY5A |
| 6 | D | A | -5.5918 | mutated: VL6A |
| 7 | N | A | -4.6468 | mutated: ST7A |
| 8 | R | A | -4.6754 | mutated: SR8A |
| 9 | E | A | -4.7376 | mutated: GE9A |
| 10 | R | A | -5.3829 | mutated: GV10A |
| 11 | R | A | -5.0735 | mutated: QR11A |
| 12 | R | A | -4.4231 | mutated: CY12A |
| 13 | R | A | -3.4915 | mutated: LR13A |
| 14 | H | A | -2.5117 | mutated: YH14A |
| 15 | Y | A | -0.9974 | mutated: SY15A |
| 16 | D | A | -1.8444 | mutated: AV16A |
| 17 | S | A | -2.1885 | mutated: CY17A |
| 18 | S | A | -0.3957 | mutated: PS18A |
| 19 | V | A | 0.8348 | mutated: IV19A |
| 20 | S | A | -0.1049 | mutated: FV20A |
| 21 | S | A | -1.7599 | mutated: TS21A |
| 22 | R | A | -2.7212 | mutated: KR22A |
| 23 | M | A | -2.6056 | mutated: IV23A |
| 24 | R | A | -2.8522 | mutated: QR24A |
| 25 | S | A | -2.5585 | mutated: GS25A |
| 26 | S | A | -3.2852 | mutated: TS26A |
| 27 | R | A | -4.4010 | mutated: CY27A |
| 28 | H | A | -3.5960 | mutated: YH28A |
| 29 | Q | A | -2.8627 | mutated: RL29A |
| 30 | S | A | -2.7896 | mutated: GV30A |
| 31 | E | A | -3.2337 | mutated: KE31A |
| 32 | A | A | 0.0000 | |
| 33 | K | A | -3.9606 | |
| 34 | C | A | 0.0000 | |
| 35 | C | A | 0.0000 | |
| 36 | K | A | -3.8139 |