Project name: DEFB1_mutations [mutate: DA1A, DH1A, HN2A, HR2A, HY2A, YC3A, YH3A, YS3A, CG5A, CS5A, CY5A, VA6A, VD6A, VF6A, VI6A, VL6A, SC7A, SN7A, ST7A, SG8A, SI8A, SR8A, GE9A, GA10A, GE10A, GR10A, GV10A, QR11A, CF12A, CG12A, CR12A, CY12A, LR13A, YC14A, YH14A, SC15A, SF15A, SY15A, AD16A, AT16A, AV16A, CF17A, CG17A, CR17A, CS17A, CY17A, PL18A, PQ18A, PR18A, PS18A, IF19A, IT19A, IV19A, FL20A, FS20A, FV20A, TA21A, TI21A, TN21A, TS21A, KE22A, KN22A, KR22A, IM23A, IT23A, IV23A, QH24A, QK24A, QP24A, QR24A, GD25A, GS25A, TA26A, TI26A, TN26A, TS26A, CF27A, CG27A, CR27A, CY27A, YC28A, YH28A, RQ29A, RH29A, RW29A, RL29A, GD30A, GE30A, GR30A, GS30A, GV30A, KE31A]

Status: done

Started: 2026-04-24 15:57:01
Settings
Chain sequence(s) A: DHYNCVSSGGQCLYSACPIFTKIQGTCYRGKAKCCK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues SY15A,YH14A,CY17A,AV16A,QR11A,GV10A,LR13A,CY12A,IV19A,PS18A,DH1A,YS3A,HY2A,CY5A,ST7A,VL6A,GE9A,SR8A,KE31A,GV30A,FV20A,TS21A,KR22A,IV23A,QR24A,GS25A,TS26A,CY27A,YH28A,RL29A
Energy difference between WT (input) and mutated protein (by FoldX) 37.5615 kcal/mol

CAUTION: Your mutation/s can destabilize the protein structure

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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:01:11)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (01:25:40)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (01:26:22)
[INFO]       Main:     Simulation completed successfully.                                          (01:26:23)
Show buried residues

Minimal score value
-5.5918
Maximal score value
0.8348
Average score
-2.8003
Total score value
-100.811

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 H A -3.5341 mutated: DH1A
2 R A -4.5867 mutated: HY2A
3 S A -3.2431 mutated: YS3A
4 N A -3.7766
5 S A 0.0000 mutated: CY5A
6 D A -5.5918 mutated: VL6A
7 N A -4.6468 mutated: ST7A
8 R A -4.6754 mutated: SR8A
9 E A -4.7376 mutated: GE9A
10 R A -5.3829 mutated: GV10A
11 R A -5.0735 mutated: QR11A
12 R A -4.4231 mutated: CY12A
13 R A -3.4915 mutated: LR13A
14 H A -2.5117 mutated: YH14A
15 Y A -0.9974 mutated: SY15A
16 D A -1.8444 mutated: AV16A
17 S A -2.1885 mutated: CY17A
18 S A -0.3957 mutated: PS18A
19 V A 0.8348 mutated: IV19A
20 S A -0.1049 mutated: FV20A
21 S A -1.7599 mutated: TS21A
22 R A -2.7212 mutated: KR22A
23 M A -2.6056 mutated: IV23A
24 R A -2.8522 mutated: QR24A
25 S A -2.5585 mutated: GS25A
26 S A -3.2852 mutated: TS26A
27 R A -4.4010 mutated: CY27A
28 H A -3.5960 mutated: YH28A
29 Q A -2.8627 mutated: RL29A
30 S A -2.7896 mutated: GV30A
31 E A -3.2337 mutated: KE31A
32 A A 0.0000
33 K A -3.9606
34 C A 0.0000
35 C A 0.0000
36 K A -3.8139
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Laboratory of Theory of Biopolymers 2018