Project name: query_structure

Status: done

Started: 2025-11-29 10:04:33
Settings
Chain sequence(s) A: GIPCGESCVFIPCITAAIGCSCKSKVCYRN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:27)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:28)
Show buried residues

Minimal score value
-2.0066
Maximal score value
2.9068
Average score
0.2961
Total score value
8.8816

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.5449
2 I A 1.0381
3 P A 0.0962
4 C A 0.3393
5 G A -0.3646
6 E A 0.0481
7 S A 0.3086
8 C A 1.0084
9 V A 1.6412
10 F A 2.7976
11 I A 2.9068
12 P A 1.5706
13 C A 0.0000
14 I A 2.3904
15 T A 1.3623
16 A A 1.0818
17 A A 1.2943
18 I A 1.8145
19 G A 0.2805
20 C A 0.0000
21 S A -0.5803
22 C A -0.6005
23 K A -2.0066
24 S A -1.4058
25 K A -1.4585
26 V A -0.7366
27 C A 0.0000
28 Y A -0.6696
29 R A -1.1468
30 N A -1.5829
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Laboratory of Theory of Biopolymers 2018