| Chain sequence(s) |
A: GIPCGESCVFIPCITAAIGCSCKSKVCYRN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:27)
[INFO] Main: Simulation completed successfully. (00:00:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.5449 | |
| 2 | I | A | 1.0381 | |
| 3 | P | A | 0.0962 | |
| 4 | C | A | 0.3393 | |
| 5 | G | A | -0.3646 | |
| 6 | E | A | 0.0481 | |
| 7 | S | A | 0.3086 | |
| 8 | C | A | 1.0084 | |
| 9 | V | A | 1.6412 | |
| 10 | F | A | 2.7976 | |
| 11 | I | A | 2.9068 | |
| 12 | P | A | 1.5706 | |
| 13 | C | A | 0.0000 | |
| 14 | I | A | 2.3904 | |
| 15 | T | A | 1.3623 | |
| 16 | A | A | 1.0818 | |
| 17 | A | A | 1.2943 | |
| 18 | I | A | 1.8145 | |
| 19 | G | A | 0.2805 | |
| 20 | C | A | 0.0000 | |
| 21 | S | A | -0.5803 | |
| 22 | C | A | -0.6005 | |
| 23 | K | A | -2.0066 | |
| 24 | S | A | -1.4058 | |
| 25 | K | A | -1.4585 | |
| 26 | V | A | -0.7366 | |
| 27 | C | A | 0.0000 | |
| 28 | Y | A | -0.6696 | |
| 29 | R | A | -1.1468 | |
| 30 | N | A | -1.5829 |