| Chain sequence(s) |
A: MAEDEDNQQGQGEGLKYLGFVQDAATYAVTTFSNVYLFAKDKSGPLQPGVDIIEGPVKNVAVPLYNRFSYIPNGALKFVDSTVVASVTIIDRSLPPIVKDASIQVVSAIRAAPEAARSLASSLPGQTKILAKVFYGEN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | NA73A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.637782 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:01:03)
[INFO] FoldX: Starting FoldX energy minimalization (00:01:16)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:10)
[INFO] Main: Simulation completed successfully. (00:02:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.4325 | |
| 2 | A | A | -1.0382 | |
| 3 | E | A | -3.1637 | |
| 4 | D | A | -4.0628 | |
| 5 | E | A | -4.6661 | |
| 6 | D | A | -4.6327 | |
| 7 | N | A | -4.1028 | |
| 8 | Q | A | -3.6555 | |
| 9 | Q | A | -3.6454 | |
| 10 | G | A | -2.8707 | |
| 11 | Q | A | -2.7952 | |
| 12 | G | A | -2.2218 | |
| 13 | E | A | -2.5494 | |
| 14 | G | A | -1.1241 | |
| 15 | L | A | 0.2953 | |
| 16 | K | A | -1.0696 | |
| 17 | Y | A | 0.1018 | |
| 18 | L | A | 0.8969 | |
| 19 | G | A | -0.0145 | |
| 20 | F | A | 0.2559 | |
| 21 | V | A | 0.4616 | |
| 22 | Q | A | -1.0545 | |
| 23 | D | A | -1.4148 | |
| 24 | A | A | -0.0913 | |
| 25 | A | A | 0.2973 | |
| 26 | T | A | 0.3354 | |
| 27 | Y | A | 0.9549 | |
| 28 | A | A | 1.2957 | |
| 29 | V | A | 2.0286 | |
| 30 | T | A | 1.1537 | |
| 31 | T | A | 1.1104 | |
| 32 | F | A | 1.9512 | |
| 33 | S | A | 1.3446 | |
| 34 | N | A | 0.4133 | |
| 35 | V | A | 1.1892 | |
| 36 | Y | A | 1.0943 | |
| 37 | L | A | 1.1582 | |
| 38 | F | A | 0.7877 | |
| 39 | A | A | -0.3148 | |
| 40 | K | A | -1.5695 | |
| 41 | D | A | -2.2595 | |
| 42 | K | A | -2.2873 | |
| 43 | S | A | -1.5042 | |
| 44 | G | A | -1.4375 | |
| 45 | P | A | -0.4742 | |
| 46 | L | A | 0.1992 | |
| 47 | Q | A | -1.1035 | |
| 48 | P | A | -0.4327 | |
| 49 | G | A | -0.0245 | |
| 50 | V | A | -0.1214 | |
| 51 | D | A | -0.9500 | |
| 52 | I | A | 1.5643 | |
| 53 | I | A | 1.6344 | |
| 54 | E | A | -0.3320 | |
| 55 | G | A | -0.3661 | |
| 56 | P | A | 0.0309 | |
| 57 | V | A | 1.0828 | |
| 58 | K | A | -0.9916 | |
| 59 | N | A | -1.0778 | |
| 60 | V | A | 0.7183 | |
| 61 | A | A | 0.7751 | |
| 62 | V | A | 1.3605 | |
| 63 | P | A | 0.4120 | |
| 64 | L | A | 0.9223 | |
| 65 | Y | A | 1.5210 | |
| 66 | N | A | -0.2620 | |
| 67 | R | A | -0.1147 | |
| 68 | F | A | 1.6717 | |
| 69 | S | A | 0.9388 | |
| 70 | Y | A | 1.5706 | |
| 71 | I | A | 1.7032 | |
| 72 | P | A | 0.8427 | |
| 73 | A | A | 0.2889 | mutated: NA73A |
| 74 | G | A | 0.3879 | |
| 75 | A | A | 0.7239 | |
| 76 | L | A | 0.5901 | |
| 77 | K | A | -0.9431 | |
| 78 | F | A | 0.9866 | |
| 79 | V | A | 1.5888 | |
| 80 | D | A | -0.3419 | |
| 81 | S | A | 0.5261 | |
| 82 | T | A | 1.2268 | |
| 83 | V | A | 2.0073 | |
| 84 | V | A | 2.8131 | |
| 85 | A | A | 1.9412 | |
| 86 | S | A | 1.9848 | |
| 87 | V | A | 2.9075 | |
| 88 | T | A | 1.6119 | |
| 89 | I | A | 2.0725 | |
| 90 | I | A | 1.0550 | |
| 91 | D | A | -0.6304 | |
| 92 | R | A | -1.3805 | |
| 93 | S | A | -0.5243 | |
| 94 | L | A | 0.2282 | |
| 95 | P | A | -0.1437 | |
| 96 | P | A | -0.0358 | |
| 97 | I | A | 1.4599 | |
| 98 | V | A | 0.9242 | |
| 99 | K | A | 0.0971 | |
| 100 | D | A | -0.7626 | |
| 101 | A | A | 0.1368 | |
| 102 | S | A | 0.8690 | |
| 103 | I | A | 1.4106 | |
| 104 | Q | A | -0.4089 | |
| 105 | V | A | 0.5848 | |
| 106 | V | A | 0.8086 | |
| 107 | S | A | 0.0030 | |
| 108 | A | A | -0.2076 | |
| 109 | I | A | -0.3582 | |
| 110 | R | A | -1.7312 | |
| 111 | A | A | -0.8067 | |
| 112 | A | A | -1.1113 | |
| 113 | P | A | -1.3746 | |
| 114 | E | A | -2.1291 | |
| 115 | A | A | -0.9477 | |
| 116 | A | A | -0.7226 | |
| 117 | R | A | -1.3496 | |
| 118 | S | A | -0.3119 | |
| 119 | L | A | 1.1716 | |
| 120 | A | A | 0.3049 | |
| 121 | S | A | 0.2697 | |
| 122 | S | A | 0.6493 | |
| 123 | L | A | 1.2998 | |
| 124 | P | A | -0.2020 | |
| 125 | G | A | -0.5263 | |
| 126 | Q | A | -0.3725 | |
| 127 | T | A | -0.6515 | |
| 128 | K | A | -1.1892 | |
| 129 | I | A | 1.2033 | |
| 130 | L | A | 1.2630 | |
| 131 | A | A | 0.5729 | |
| 132 | K | A | -0.0370 | |
| 133 | V | A | 2.2953 | |
| 134 | F | A | 2.9333 | |
| 135 | Y | A | 1.3602 | |
| 136 | G | A | -0.4902 | |
| 137 | E | A | -2.2088 | |
| 138 | N | A | -2.0867 |