| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVDHYYITYGETGHYWYYQAFAVPGSKSTATISGLSPGVDYTITVYAPFSVPVMSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:27)
[INFO] Main: Simulation completed successfully. (00:01:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.8238 | |
| 2 | S | A | 0.8294 | |
| 3 | S | A | 1.5638 | |
| 4 | V | A | 0.6097 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.6449 | |
| 7 | K | A | -2.6586 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.9503 | |
| 10 | V | A | 0.0751 | |
| 11 | V | A | 1.5242 | |
| 12 | A | A | 0.8879 | |
| 13 | A | A | 0.3180 | |
| 14 | T | A | -0.3902 | |
| 15 | P | A | -0.8194 | |
| 16 | T | A | -0.5411 | |
| 17 | S | A | -0.3292 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7291 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.9757 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.6824 | |
| 24 | A | A | -1.2067 | |
| 25 | P | A | 0.0782 | |
| 26 | A | A | 0.5284 | |
| 27 | V | A | 0.9553 | |
| 28 | T | A | 0.0260 | |
| 29 | V | A | -0.4966 | |
| 30 | D | A | -1.8021 | |
| 31 | H | A | -1.1281 | |
| 32 | Y | A | 0.0000 | |
| 33 | Y | A | 0.5963 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.4527 | |
| 36 | Y | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -0.3930 | |
| 39 | T | A | -0.6951 | |
| 40 | G | A | -0.3888 | |
| 41 | H | A | 0.4633 | |
| 42 | Y | A | 2.0665 | |
| 43 | W | A | 2.3929 | |
| 44 | Y | A | 2.3524 | |
| 45 | Y | A | 1.9566 | |
| 46 | Q | A | 0.2901 | |
| 47 | A | A | 0.4629 | |
| 48 | F | A | 0.4986 | |
| 49 | A | A | 0.2238 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.2224 | |
| 52 | G | A | -1.4573 | |
| 53 | S | A | -1.4197 | |
| 54 | K | A | -2.1378 | |
| 55 | S | A | -1.3724 | |
| 56 | T | A | -0.7296 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2332 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.4820 | |
| 61 | G | A | -0.6928 | |
| 62 | L | A | 0.0000 | |
| 63 | S | A | -0.8181 | |
| 64 | P | A | -0.9794 | |
| 65 | G | A | -1.0478 | |
| 66 | V | A | -0.8100 | |
| 67 | D | A | -1.7303 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.6687 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | 0.1401 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.8016 | |
| 74 | A | A | 0.0000 | |
| 75 | P | A | 1.2116 | |
| 76 | F | A | 2.3574 | |
| 77 | S | A | 2.3717 | |
| 78 | V | A | 2.8742 | |
| 79 | P | A | 1.9481 | |
| 80 | V | A | 2.9078 | |
| 81 | M | A | 2.4523 | |
| 82 | S | A | 1.2815 | |
| 83 | P | A | 0.7321 | |
| 84 | I | A | 0.2210 | |
| 85 | S | A | -0.5294 | |
| 86 | I | A | -0.7785 | |
| 87 | N | A | -1.7199 | |
| 88 | Y | A | -1.4044 | |
| 89 | R | A | -2.2757 | |
| 90 | T | A | -1.1618 |