| Chain sequence(s) |
A: CPEGTNAYRSYCYYFNEDRETWVDADLYCQNMNSGNLVSVLTQAEGAFVASLIKESGTDDFNVWIGLHDPKKNRRWHWSSGSLVSYKSWGIGAPSSVNPGYCVSLTSSTGFQKWKDVPCEDKFSFVCKFKN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:10)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:10)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:10)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:10)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:10)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:30)
[INFO] Main: Simulation completed successfully. (00:01:31)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 14 | C | A | -0.2256 | |
| 15 | P | A | -1.1100 | |
| 16 | E | A | -2.0724 | |
| 17 | G | A | -1.4108 | |
| 18 | T | A | -0.6601 | |
| 19 | N | A | -0.3507 | |
| 20 | A | A | 0.5619 | |
| 21 | Y | A | 1.6656 | |
| 24 | Y | A | 0.6638 | |
| 25 | C | A | 0.0000 | |
| 26 | Y | A | 0.0000 | |
| 27 | Y | A | -0.4650 | |
| 28 | F | A | -0.9271 | |
| 29 | N | A | -1.7584 | |
| 30 | E | A | -3.3089 | |
| 31 | D | A | -3.8030 | |
| 32 | R | A | -4.1253 | |
| 33 | E | A | -2.8832 | |
| 34 | T | A | -1.9698 | |
| 35 | W | A | 0.0000 | |
| 36 | V | A | 0.6639 | |
| 37 | D | A | -0.8169 | |
| 38 | A | A | 0.0000 | |
| 39 | D | A | 0.0000 | |
| 40 | L | A | 0.3572 | |
| 41 | Y | A | 0.0660 | |
| 42 | C | A | 0.0000 | |
| 43 | Q | A | -1.0719 | |
| 44 | N | A | -0.9965 | |
| 45 | M | A | 0.0850 | |
| 46 | N | A | -0.9336 | |
| 47 | S | A | -1.1706 | |
| 48 | G | A | 0.0000 | |
| 49 | N | A | -0.6919 | |
| 50 | L | A | 0.0000 | |
| 51 | V | A | 0.0000 | |
| 52 | S | A | 0.0000 | |
| 53 | V | A | 0.0000 | |
| 54 | L | A | 0.1503 | |
| 55 | T | A | -0.6157 | |
| 56 | Q | A | -1.4932 | |
| 57 | A | A | -0.4615 | |
| 58 | E | A | 0.0000 | |
| 59 | G | A | -0.8656 | |
| 60 | A | A | -0.4787 | |
| 61 | F | A | -0.0626 | |
| 62 | V | A | 0.0000 | |
| 63 | A | A | 0.0000 | |
| 64 | S | A | -1.2568 | |
| 65 | L | A | -1.0647 | |
| 66 | I | A | 0.0000 | |
| 67 | K | A | -3.0223 | |
| 68 | E | A | -2.8324 | |
| 69 | S | A | -2.2248 | |
| 70 | G | A | -2.1108 | |
| 71 | T | A | -1.9998 | |
| 72 | D | A | -2.0237 | |
| 73 | D | A | -0.9528 | |
| 74 | F | A | 1.2116 | |
| 75 | N | A | -0.0760 | |
| 76 | V | A | 0.0000 | |
| 77 | W | A | 0.0000 | |
| 78 | I | A | 0.0000 | |
| 79 | G | A | 0.0000 | |
| 80 | L | A | 0.0000 | |
| 81 | H | A | -0.8146 | |
| 82 | D | A | 0.0000 | |
| 83 | P | A | -2.0621 | |
| 84 | K | A | -3.4108 | |
| 85 | K | A | -3.5498 | |
| 86 | N | A | -3.3601 | |
| 87 | R | A | -2.7214 | |
| 88 | R | A | -3.1276 | |
| 89 | W | A | -1.5231 | |
| 90 | H | A | -0.9169 | |
| 91 | W | A | 0.0000 | |
| 92 | S | A | -0.3341 | |
| 93 | S | A | -0.4534 | |
| 94 | G | A | -0.2753 | |
| 95 | S | A | 0.4862 | |
| 96 | L | A | 1.6130 | |
| 97 | V | A | 0.8891 | |
| 98 | S | A | 0.2523 | |
| 99 | Y | A | -0.4489 | |
| 100 | K | A | -1.6881 | |
| 101 | S | A | 0.0000 | |
| 102 | W | A | -0.4706 | |
| 103 | G | A | 0.0718 | |
| 104 | I | A | 1.5847 | |
| 105 | G | A | 0.5502 | |
| 106 | A | A | 0.0632 | |
| 107 | P | A | -0.0930 | |
| 108 | S | A | -0.0287 | |
| 109 | S | A | -0.0079 | |
| 110 | V | A | 0.9499 | |
| 111 | N | A | -0.5118 | |
| 112 | P | A | -0.7450 | |
| 113 | G | A | 0.0000 | |
| 114 | Y | A | -1.2466 | |
| 115 | C | A | 0.0000 | |
| 116 | V | A | 0.0000 | |
| 117 | S | A | 0.0000 | |
| 118 | L | A | 0.0000 | |
| 119 | T | A | 0.0000 | |
| 120 | S | A | -0.3634 | |
| 121 | S | A | -0.1456 | |
| 122 | T | A | -0.3175 | |
| 123 | G | A | -0.7804 | |
| 124 | F | A | 0.0000 | |
| 125 | Q | A | -1.6912 | |
| 126 | K | A | -1.3246 | |
| 127 | W | A | 0.0000 | |
| 128 | K | A | -0.6838 | |
| 129 | D | A | 0.0000 | |
| 130 | V | A | 0.0000 | |
| 131 | P | A | -1.2122 | |
| 132 | C | A | -1.0591 | |
| 133 | E | A | -2.3561 | |
| 134 | D | A | -2.3515 | |
| 135 | K | A | -3.2512 | |
| 136 | F | A | 0.0000 | |
| 137 | S | A | 0.0000 | |
| 138 | F | A | 0.0000 | |
| 139 | V | A | 0.0000 | |
| 140 | C | A | 0.0000 | |
| 141 | K | A | -0.4702 | |
| 142 | F | A | 0.0000 | |
| 143 | K | A | -1.8975 | |
| 144 | N | A | -1.7181 |