Project name: ab42_run1 [mutate: VG39A]

Status: done

Started: 2026-03-19 12:52:19
Settings
Chain sequence(s) A: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues VG39A
Energy difference between WT (input) and mutated protein (by FoldX) 0.389405 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:00:30)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:33)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:59)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:59)
Show buried residues

Minimal score value
-3.0893
Maximal score value
3.1308
Average score
-0.0999
Total score value
-4.1963

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -2.2949
2 A A -1.7139
3 E A -2.4638
4 F A -1.0030
5 R A -2.8663
6 H A -3.0893
7 D A -2.7669
8 S A -1.6368
9 G A -1.3808
10 Y A -1.1843
11 E A -2.2277
12 V A -0.5396
13 H A -0.6374
14 H A -1.2089
15 Q A -0.3868
16 K A 0.1910
17 L A 1.8895
18 V A 2.1305
19 F A 2.1754
20 F A 2.1339
21 A A 0.8150
22 E A -0.9888
23 D A -1.1397
24 V A -0.8140
25 G A -1.5412
26 S A -1.9558
27 N A -2.3569
28 K A -1.8485
29 G A -1.1084
30 A A -0.3163
31 I A 0.5002
32 I A 1.3343
33 G A 1.2595
34 L A 2.4760
35 M A 2.4903
36 V A 3.1308
37 G A 2.1145
38 G A 1.7427
39 G A 1.8634 mutated: VG39A
40 V A 3.0412
41 I A 2.7723
42 A A 1.2132
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Laboratory of Theory of Biopolymers 2018