Chain sequence(s) |
H: QVQLVESGGGVVQPGRSLRLSCAASGFKFSGYGMHWVRQAPGKGLEWVAVIWYDGSKKYYVDSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARQMGYWHFDLWGRGTLVTVSS
L: EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPPLTFGGGTKVEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:46) [INFO] Main: Simulation completed successfully. (00:01:48) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.1460 | |
2 | V | H | -0.4494 | |
3 | Q | H | -0.7422 | |
4 | L | H | 0.0000 | |
5 | V | H | 0.3726 | |
6 | E | H | 0.0000 | |
7 | S | H | -0.3793 | |
8 | G | H | -0.7527 | |
9 | G | H | 0.1684 | |
11 | G | H | 0.9476 | |
12 | V | H | 1.8025 | |
13 | V | H | -0.0213 | |
14 | Q | H | -1.1949 | |
15 | P | H | -1.8054 | |
16 | G | H | -2.0498 | |
17 | R | H | -2.5861 | |
18 | S | H | -1.9199 | |
19 | L | H | -1.2342 | |
20 | R | H | -2.0060 | |
21 | L | H | 0.0000 | |
22 | S | H | -0.3949 | |
23 | C | H | 0.0000 | |
24 | A | H | -0.2321 | |
25 | A | H | 0.0000 | |
26 | S | H | -0.9172 | |
27 | G | H | -1.0528 | |
28 | F | H | -0.9945 | |
29 | K | H | -1.8319 | |
30 | F | H | 0.0000 | |
35 | S | H | -1.2676 | |
36 | G | H | -0.8013 | |
37 | Y | H | -0.1325 | |
38 | G | H | 0.0000 | |
39 | M | H | 0.0000 | |
40 | H | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.6046 | |
45 | A | H | -1.0239 | |
46 | P | H | -0.8130 | |
47 | G | H | -1.4569 | |
48 | K | H | -2.2726 | |
49 | G | H | -1.3560 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.8436 | |
52 | W | H | 0.0000 | |
53 | V | H | 0.0000 | |
54 | A | H | 0.0000 | |
55 | V | H | 0.0000 | |
56 | I | H | 0.0000 | |
57 | W | H | -0.5788 | |
58 | Y | H | -0.1029 | |
59 | D | H | -1.4799 | |
62 | G | H | -1.2902 | |
63 | S | H | -1.3361 | |
64 | K | H | -1.8727 | |
65 | K | H | -1.2498 | |
66 | Y | H | -0.5982 | |
67 | Y | H | -0.7522 | |
68 | V | H | -1.0007 | |
69 | D | H | -2.3101 | |
70 | S | H | -1.6330 | |
71 | V | H | 0.0000 | |
72 | K | H | -2.3018 | |
74 | G | H | -1.6643 | |
75 | R | H | -1.4907 | |
76 | F | H | 0.0000 | |
77 | T | H | -0.8085 | |
78 | I | H | 0.0000 | |
79 | S | H | -0.5186 | |
80 | R | H | -0.9213 | |
81 | D | H | -1.6229 | |
82 | N | H | -1.9302 | |
83 | S | H | -1.5524 | |
84 | K | H | -2.3787 | |
85 | N | H | -2.0740 | |
86 | T | H | -0.9943 | |
87 | L | H | 0.0000 | |
88 | Y | H | -0.3838 | |
89 | L | H | 0.0000 | |
90 | Q | H | -1.0961 | |
91 | M | H | 0.0000 | |
92 | N | H | -1.7721 | |
93 | S | H | -1.7170 | |
94 | L | H | 0.0000 | |
95 | R | H | -2.5173 | |
96 | A | H | -1.6577 | |
97 | E | H | -2.2689 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.3462 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.7356 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | -0.3577 | |
107 | Q | H | 0.0724 | |
108 | M | H | 0.2061 | |
109 | G | H | 0.1233 | |
110 | Y | H | 0.8294 | |
113 | W | H | 0.4961 | |
114 | H | H | 0.0000 | |
115 | F | H | 0.0000 | |
116 | D | H | -0.7853 | |
117 | L | H | -0.3875 | |
118 | W | H | 0.0000 | |
119 | G | H | -0.8614 | |
120 | R | H | -1.7948 | |
121 | G | H | 0.0000 | |
122 | T | H | 0.4020 | |
123 | L | H | 1.5521 | |
124 | V | H | 0.0000 | |
125 | T | H | 0.5195 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.4954 | |
128 | S | H | -0.4581 | |
1 | E | L | -1.7692 | |
2 | I | L | 0.0000 | |
3 | V | L | 0.7094 | |
4 | L | L | 0.0000 | |
5 | T | L | -0.6068 | |
6 | Q | L | -0.6691 | |
7 | S | L | -0.7340 | |
8 | P | L | -0.4003 | |
9 | A | L | -0.3407 | |
10 | T | L | -0.3946 | |
11 | L | L | -0.0671 | |
12 | S | L | -0.1669 | |
13 | L | L | -0.4802 | |
14 | S | L | -0.7879 | |
15 | P | L | -1.1656 | |
16 | G | L | -1.5039 | |
17 | E | L | -2.0724 | |
18 | R | L | -2.4155 | |
19 | A | L | 0.0000 | |
20 | T | L | -0.6216 | |
21 | L | L | 0.0000 | |
22 | S | L | -0.8512 | |
23 | C | L | 0.0000 | |
24 | R | L | -2.3342 | |
25 | A | L | 0.0000 | |
26 | S | L | -1.0297 | |
27 | Q | L | -1.8801 | |
28 | S | L | -1.4415 | |
29 | V | L | 0.0000 | |
36 | S | L | -0.7011 | |
37 | S | L | -0.2805 | |
38 | Y | L | 0.3096 | |
39 | L | L | 0.0000 | |
40 | A | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | 0.0000 | |
44 | Q | L | 0.0000 | |
45 | K | L | -1.1210 | |
46 | P | L | -0.8532 | |
47 | G | L | -1.4081 | |
48 | Q | L | -1.9588 | |
49 | A | L | -1.3599 | |
50 | P | L | 0.0000 | |
51 | R | L | -0.9391 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | -0.1044 | |
56 | D | L | -0.3063 | |
57 | A | L | 0.0000 | |
65 | S | L | -0.8835 | |
66 | N | L | -1.2787 | |
67 | R | L | -1.4482 | |
68 | A | L | -0.9165 | |
69 | T | L | -0.6755 | |
70 | G | L | -0.5829 | |
71 | I | L | -0.5497 | |
72 | P | L | -0.3503 | |
74 | A | L | -0.3378 | |
75 | R | L | -0.6077 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.6021 | |
78 | G | L | 0.0000 | |
79 | S | L | -0.7110 | |
80 | G | L | -1.0365 | |
83 | S | L | -0.9749 | |
84 | G | L | -1.1145 | |
85 | T | L | -1.7256 | |
86 | D | L | -2.0852 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.7440 | |
89 | L | L | 0.0000 | |
90 | T | L | -0.5789 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.1976 | |
93 | S | L | -1.4514 | |
94 | L | L | 0.0000 | |
95 | E | L | -1.6803 | |
96 | P | L | -1.0441 | |
97 | E | L | -1.6791 | |
98 | D | L | 0.0000 | |
99 | F | L | -0.2037 | |
100 | A | L | 0.0000 | |
101 | V | L | -0.0845 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | R | L | 0.0000 | |
108 | S | L | -0.5506 | |
109 | N | L | -1.6606 | |
113 | W | L | -0.8055 | |
114 | P | L | -0.7266 | |
115 | P | L | -0.8679 | |
116 | L | L | 0.0000 | |
117 | T | L | -0.1355 | |
118 | F | L | 0.1926 | |
119 | G | L | 0.0000 | |
120 | G | L | -0.6413 | |
121 | G | L | -0.6816 | |
122 | T | L | 0.0000 | |
123 | K | L | -0.6324 | |
124 | V | L | 0.0000 | |
125 | E | L | 0.0619 | |
126 | I | L | 0.9163 | |
127 | K | L | -0.8639 |