| Chain sequence(s) |
B: CGSGMKLDLSSLSVEELEELLKSFEKVLEEEEKDLNRYPGSTLEENKKAVEEVKEALEKKKKEL
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:49)
[INFO] Main: Simulation completed successfully. (00:04:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | B | 0.2428 | |
| 2 | G | B | -0.8006 | |
| 3 | S | B | -0.4923 | |
| 4 | G | B | -0.6312 | |
| 5 | M | B | 0.1373 | |
| 6 | K | B | -1.0606 | |
| 7 | L | B | -0.3341 | |
| 8 | D | B | -1.4040 | |
| 9 | L | B | -1.2245 | |
| 10 | S | B | -0.7187 | |
| 11 | S | B | -0.6721 | |
| 12 | L | B | -0.9615 | |
| 13 | S | B | -1.6779 | |
| 14 | V | B | -2.4225 | |
| 15 | E | B | -3.4176 | |
| 16 | E | B | -3.5820 | |
| 17 | L | B | 0.0000 | |
| 18 | E | B | -3.9045 | |
| 19 | E | B | -4.1261 | |
| 20 | L | B | -2.6125 | |
| 21 | L | B | -3.2812 | |
| 22 | K | B | -3.5571 | |
| 23 | S | B | -2.1283 | |
| 24 | F | B | -2.1180 | |
| 25 | E | B | -3.6150 | |
| 26 | K | B | -3.5378 | |
| 27 | V | B | -2.2503 | |
| 28 | L | B | -3.3777 | |
| 29 | E | B | -4.4272 | |
| 30 | E | B | -4.0412 | |
| 31 | E | B | 0.0000 | |
| 32 | E | B | -4.0886 | |
| 33 | K | B | -4.0228 | |
| 34 | D | B | -3.4290 | |
| 35 | L | B | -1.9004 | |
| 36 | N | B | -2.4866 | |
| 37 | R | B | -3.0016 | |
| 38 | Y | B | -1.8479 | |
| 39 | P | B | -1.4350 | |
| 40 | G | B | -1.7076 | |
| 41 | S | B | -1.6747 | |
| 42 | T | B | -1.8992 | |
| 43 | L | B | -2.5136 | |
| 44 | E | B | -3.6644 | |
| 45 | E | B | -3.7662 | |
| 46 | N | B | 0.0000 | |
| 47 | K | B | -4.0147 | |
| 48 | K | B | -4.5020 | |
| 49 | A | B | -3.4466 | |
| 50 | V | B | 0.0000 | |
| 51 | E | B | -4.5041 | |
| 52 | E | B | -4.2382 | |
| 53 | V | B | 0.0000 | |
| 54 | K | B | -4.2297 | |
| 55 | E | B | -4.6088 | |
| 56 | A | B | -3.7601 | |
| 57 | L | B | -4.1448 | |
| 58 | E | B | -4.8145 | |
| 59 | K | B | -4.4216 | |
| 60 | K | B | -3.4202 | |
| 61 | K | B | -3.7322 | |
| 62 | K | B | -3.8646 | |
| 63 | E | B | -3.0775 | |
| 64 | L | B | -0.5794 |