Project name: AAB-PP3120

Status: done

Started: 2026-03-31 14:35:55
Settings
Chain sequence(s) H: QVQLVESGGGVVQPGESLKISCAASGFTFSSYGMHWVRQAPGKGLEWVSAISGSGGTTFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARSTYYYGGSGYDYYFEPWGPGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQHIRSSLAWYQQKPGKAPKLLIYGASSRATGIPDRFSGSGSGTDFTLTISSLQPEDFATYYCQHTYITPYTFGQGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:02)
Show buried residues

Minimal score value
-3.1596
Maximal score value
2.0952
Average score
-0.5592
Total score value
-129.7292

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
0 Q H -1.3281
1 V H -0.7381
2 Q H -0.8961
3 L H 0.0000
4 V H 1.3390
5 E H 0.0000
6 S H -0.1136
7 G H -0.7601
8 G H 0.1565
9 G H 0.9329
10 V H 1.5559
11 V H 0.0000
12 Q H -1.7834
13 P H -2.0883
14 G H -2.0557
15 E H -2.2202
16 S H -1.6102
17 L H -1.0027
18 K H -1.9330
19 I H 0.0000
20 S H -0.3098
21 C H 0.0000
22 A H 0.0116
23 A H 0.0000
24 S H -0.5873
25 G H -0.8811
26 F H -0.2987
27 T H -0.1710
28 F H 0.0000
29 S H -0.8266
30 S H -0.1157
31 Y H 0.2370
32 G H 0.0574
33 M H 0.0000
34 H H 0.0000
35 W H 0.0000
36 V H 0.0000
37 R H 0.0000
38 Q H -0.7154
39 A H -1.0386
40 P H -0.9823
41 G H -1.5058
42 K H -2.3844
43 G H -1.6192
44 L H 0.0000
45 E H -1.2256
46 W H 0.0000
47 V H 0.0000
48 S H 0.0000
49 A H 0.0000
50 I H 0.0000
51 S H -0.2574
52 G H -0.4873
53 S H -0.7055
54 G H -0.8080
55 G H -0.7088
56 T H -0.1618
57 T H 0.4332
58 F H 0.9167
59 Y H -0.2069
60 A H 0.0000
61 D H -2.3038
62 S H -1.7098
63 V H 0.0000
64 K H -2.3831
65 G H -1.6949
66 R H -1.2536
67 F H 0.0000
68 T H -0.6383
69 I H 0.0000
70 S H -0.4576
71 R H -1.0949
72 D H -1.6565
73 N H -1.8196
74 S H -1.6409
75 K H -2.4432
76 N H -1.8706
77 T H -1.0081
78 L H 0.0000
79 Y H -0.4604
80 L H 0.0000
81 Q H -1.1212
82 M H 0.0000
83 N H -1.7186
84 S H -1.6508
85 L H 0.0000
86 R H -2.7565
87 A H -1.9060
88 E H -2.3279
89 D H 0.0000
90 T H -0.4264
91 A H 0.0000
92 V H 0.9030
93 Y H 0.0000
94 Y H 0.0000
95 C H 0.0000
96 A H 0.0000
97 R H -0.4333
98 S H 0.0000
99 T H 0.7864
100 Y H 2.0107
101 Y H 1.6820
102 Y H 1.4142
103 G H -0.0856
104 G H -0.5181
105 S H -0.3043
106 G H 0.2147
107 Y H 1.5333
108 D H 1.1990
109 Y H 1.5197
110 Y H 0.4780
111 F H 0.0000
112 E H -0.8112
113 P H -0.8216
114 W H 0.0000
115 G H 0.0000
116 P H -0.4014
117 G H 0.1742
118 T H 0.7560
119 L H 1.7407
120 V H 0.0000
121 T H 0.3799
122 V H 0.0000
123 S H -0.6544
124 S H -0.5962
125 D L -2.0057
126 I L 0.0000
127 Q L -2.1915
128 M L 0.0000
129 T L -1.2804
130 Q L 0.0000
131 S L -0.7306
132 P L -0.5978
133 S L -0.9619
134 S L -1.1327
135 L L -0.6517
136 S L -0.7041
137 A L 0.0000
138 S L -0.1490
139 V L 0.7172
140 G L -0.7087
141 D L -1.6688
142 R L -2.3426
143 V L 0.0000
144 T L -0.6344
145 I L 0.0000
146 T L -0.9693
147 C L 0.0000
148 R L -3.0416
149 A L 0.0000
150 S L -2.2545
151 Q L -2.8557
152 H L -2.5734
153 I L 0.0000
154 R L -2.5874
155 S L -1.4332
156 S L -0.3557
157 L L 0.0000
158 A L 0.0000
159 W L 0.0000
160 Y L 0.0000
161 Q L -0.9651
162 Q L 0.0000
163 K L -2.1519
164 P L -1.4648
165 G L -1.6541
166 K L -2.5346
167 A L -1.5166
168 P L 0.0000
169 K L -1.9621
170 L L 0.0000
171 L L 0.0000
172 I L 0.0000
173 Y L -0.2128
174 G L -0.7434
175 A L 0.0000
176 S L -0.7619
177 S L -0.8023
178 R L -1.6737
179 A L -0.9722
180 T L -0.6049
181 G L -0.9204
182 I L 0.0000
183 P L -1.3877
184 D L -2.3083
185 R L -1.6189
186 F L 0.0000
187 S L -1.0267
188 G L -0.5831
189 S L -0.8166
190 G L -1.4267
191 S L -1.8202
192 G L -2.4335
193 T L -2.6648
194 D L -3.1596
195 F L 0.0000
196 T L -0.9086
197 L L 0.0000
198 T L -0.6134
199 I L 0.0000
200 S L -1.6821
201 S L -1.2898
202 L L 0.0000
203 Q L -0.7796
204 P L -0.6499
205 E L -1.8874
206 D L 0.0000
207 F L -0.5670
208 A L 0.0000
209 T L -1.2453
210 Y L 0.0000
211 Y L 0.0000
212 C L 0.0000
213 Q L 0.0000
214 H L 0.0000
215 T L 1.2201
216 Y L 1.4982
217 I L 2.0952
218 T L 0.8472
219 P L 0.0289
220 Y L 0.0000
221 T L -0.4617
222 F L -0.4793
223 G L 0.0000
224 Q L -1.5899
225 G L 0.0000
226 T L 0.0000
227 K L -2.1432
228 V L 0.0000
229 E L -0.9103
230 I L 0.9384
231 K L -0.7858
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Laboratory of Theory of Biopolymers 2018