Project name: fold_rfinf_24_22024_10_30_13_29_model_0

Status: done

Started: 2026-03-26 12:02:00
Settings
Chain sequence(s) B: SYMKKREEREKKEKEKKKEEKEKAKKEEEEKKK
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:01)
Show buried residues

Minimal score value
-7.3666
Maximal score value
-0.2252
Average score
-5.8916
Total score value
-194.4232

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S B -0.6904
2 Y B -0.2252
3 M B -1.1567
4 K B -3.6270
5 K B -4.5201
6 R B -5.0505
7 E B -6.0237
8 E B -6.6179
9 R B -7.1088
10 E B -7.1468
11 K B -7.3205
12 K B -7.3156
13 E B -7.2094
14 K B -7.2236
15 E B -7.3666
16 K B -7.1681
17 K B -6.8780
18 K B -6.9846
19 E B -7.0897
20 E B -6.7773
21 K B -6.4250
22 E B -6.7028
23 K B -6.4750
24 A B -5.5915
25 K B -6.5116
26 K B -6.6856
27 E B -6.8071
28 E B -6.8106
29 E B -6.6003
30 E B -6.3935
31 K B -5.9953
32 K B -5.3872
33 K B -4.5372
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Laboratory of Theory of Biopolymers 2018