| Chain sequence(s) |
A: MAQVQLVESGGGLVQAGGSLRLSCAASGRTYSISAMGWFRQAPGKEREFVAGISRSGGTTYYADPVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAARARGWTTFPAREIEYDYWGQGTQVTV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:32)
[INFO] Main: Simulation completed successfully. (00:01:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.4339 | |
| 2 | A | A | -0.7379 | |
| 3 | Q | A | -1.7435 | |
| 4 | V | A | -1.6443 | |
| 5 | Q | A | -1.5708 | |
| 6 | L | A | 0.0000 | |
| 7 | V | A | 0.5504 | |
| 8 | E | A | -0.1052 | |
| 9 | S | A | -0.6287 | |
| 10 | G | A | -1.0194 | |
| 11 | G | A | -0.8232 | |
| 12 | G | A | 0.0483 | |
| 13 | L | A | 1.2290 | |
| 14 | V | A | 0.2943 | |
| 15 | Q | A | -0.9478 | |
| 16 | A | A | -1.1334 | |
| 17 | G | A | -1.1810 | |
| 18 | G | A | -0.7378 | |
| 19 | S | A | -1.1869 | |
| 20 | L | A | -1.0402 | |
| 21 | R | A | -2.2571 | |
| 22 | L | A | 0.0000 | |
| 23 | S | A | -0.5698 | |
| 24 | C | A | 0.0000 | |
| 25 | A | A | -0.3421 | |
| 26 | A | A | 0.0000 | |
| 27 | S | A | -1.2278 | |
| 28 | G | A | -1.6526 | |
| 29 | R | A | -1.9144 | |
| 30 | T | A | 0.0000 | |
| 31 | Y | A | 0.1297 | |
| 32 | S | A | -0.6440 | |
| 33 | I | A | 0.0000 | |
| 34 | S | A | -0.8411 | |
| 35 | A | A | 0.0000 | |
| 36 | M | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | W | A | 0.0000 | |
| 39 | F | A | 0.0000 | |
| 40 | R | A | 0.0000 | |
| 41 | Q | A | -1.9689 | |
| 42 | A | A | -1.8720 | |
| 43 | P | A | -1.3201 | |
| 44 | G | A | -1.7856 | |
| 45 | K | A | -2.9117 | |
| 46 | E | A | -3.3335 | |
| 47 | R | A | -2.7005 | |
| 48 | E | A | -1.7470 | |
| 49 | F | A | -0.8650 | |
| 50 | V | A | 0.0000 | |
| 51 | A | A | 0.0000 | |
| 52 | G | A | 0.0000 | |
| 53 | I | A | 0.0000 | |
| 54 | S | A | -0.8269 | |
| 55 | R | A | -1.7089 | |
| 56 | S | A | -1.2950 | |
| 57 | G | A | -1.2836 | |
| 58 | G | A | -0.8942 | |
| 59 | T | A | -0.4489 | |
| 60 | T | A | 0.0771 | |
| 61 | Y | A | 0.1715 | |
| 62 | Y | A | -0.5577 | |
| 63 | A | A | -1.1748 | |
| 64 | D | A | -2.3752 | |
| 65 | P | A | -1.8329 | |
| 66 | V | A | 0.0000 | |
| 67 | K | A | -2.5292 | |
| 68 | G | A | -1.7352 | |
| 69 | R | A | -1.4479 | |
| 70 | F | A | 0.0000 | |
| 71 | T | A | -0.8895 | |
| 72 | I | A | 0.0000 | |
| 73 | S | A | -0.6866 | |
| 74 | R | A | -1.4657 | |
| 75 | D | A | -2.0965 | |
| 76 | N | A | -2.3887 | |
| 77 | A | A | -1.6995 | |
| 78 | K | A | -2.4711 | |
| 79 | N | A | -1.7410 | |
| 80 | T | A | 0.0000 | |
| 81 | V | A | 0.0000 | |
| 82 | Y | A | -0.7425 | |
| 83 | L | A | 0.0000 | |
| 84 | Q | A | -1.5720 | |
| 85 | M | A | 0.0000 | |
| 86 | N | A | -1.3416 | |
| 87 | S | A | -1.1063 | |
| 88 | L | A | 0.0000 | |
| 89 | K | A | -2.0216 | |
| 90 | P | A | -1.6774 | |
| 91 | E | A | -2.2312 | |
| 92 | D | A | 0.0000 | |
| 93 | T | A | -0.7910 | |
| 94 | A | A | 0.0000 | |
| 95 | V | A | -0.6722 | |
| 96 | Y | A | 0.0000 | |
| 97 | Y | A | -0.2826 | |
| 98 | C | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | A | A | 0.0000 | |
| 101 | R | A | -1.1804 | |
| 102 | A | A | -1.5048 | |
| 103 | R | A | -1.8554 | |
| 104 | G | A | -0.5684 | |
| 105 | W | A | 0.7316 | |
| 106 | T | A | 0.1770 | |
| 107 | T | A | 0.0455 | |
| 108 | F | A | -0.0472 | |
| 109 | P | A | -0.5252 | |
| 110 | A | A | 0.0000 | |
| 111 | R | A | -1.4830 | |
| 112 | E | A | -0.8050 | |
| 113 | I | A | 0.7193 | |
| 114 | E | A | -0.5025 | |
| 115 | Y | A | 0.0000 | |
| 116 | D | A | -1.7071 | |
| 117 | Y | A | -0.9348 | |
| 118 | W | A | -0.2853 | |
| 119 | G | A | -0.3098 | |
| 120 | Q | A | -1.0127 | |
| 121 | G | A | -0.6803 | |
| 122 | T | A | 0.0000 | |
| 123 | Q | A | -1.0361 | |
| 124 | V | A | 0.0000 | |
| 125 | T | A | -0.0349 | |
| 126 | V | A | -0.2989 |