| Chain sequence(s) |
A: MGSHHHHHHMQKKNQIAAAIVLRGLAKDGKFANTEAAAKMKKSDKIAAAIVLRGLAKDGKFAAAEAAAKQNKNDQIAAAIVLRGLAKGGKFANAEAAAKKKKNDQIAAALVLRGVAKSGKFAGAEAAAKITRNDEIAAAIVLRGMAKGGRFFASEAAAKMKKDDQIAAAIALRGMAKDGKFAVKGGG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:50)
[INFO] Main: Simulation completed successfully. (00:05:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -0.3314 | |
| 2 | G | A | -1.3792 | |
| 3 | S | A | -1.8460 | |
| 4 | H | A | -1.9783 | |
| 5 | H | A | -1.4468 | |
| 6 | H | A | -1.8142 | |
| 7 | H | A | -1.8116 | |
| 8 | H | A | -1.9336 | |
| 9 | H | A | -2.7925 | |
| 10 | M | A | -2.2813 | |
| 11 | Q | A | -2.8857 | |
| 12 | K | A | -3.5127 | |
| 13 | K | A | -3.5376 | |
| 14 | N | A | -3.1962 | |
| 15 | Q | A | -2.9817 | |
| 16 | I | A | -1.9883 | |
| 17 | A | A | -1.5333 | |
| 18 | A | A | -1.0110 | |
| 19 | A | A | 0.0000 | |
| 20 | I | A | 0.0000 | |
| 21 | V | A | 0.3084 | |
| 22 | L | A | 0.0036 | |
| 23 | R | A | -1.4794 | |
| 24 | G | A | 0.0000 | |
| 25 | L | A | -0.9891 | |
| 26 | A | A | -1.8680 | |
| 27 | K | A | -2.8760 | |
| 28 | D | A | -3.1684 | |
| 29 | G | A | -2.4370 | |
| 30 | K | A | -2.4951 | |
| 31 | F | A | -1.2906 | |
| 32 | A | A | -0.7271 | |
| 33 | N | A | -1.1520 | |
| 34 | T | A | -1.5156 | |
| 35 | E | A | -2.3084 | |
| 36 | A | A | 0.0000 | |
| 37 | A | A | -1.5798 | |
| 38 | A | A | -1.7150 | |
| 39 | K | A | -2.3042 | |
| 40 | M | A | -2.2721 | |
| 41 | K | A | -3.1847 | |
| 42 | K | A | -2.9857 | |
| 43 | S | A | -2.0498 | |
| 44 | D | A | -2.2717 | |
| 45 | K | A | -1.3203 | |
| 46 | I | A | 0.5019 | |
| 47 | A | A | 0.8196 | |
| 48 | A | A | 0.0000 | |
| 49 | A | A | 0.9942 | |
| 50 | I | A | 2.6989 | |
| 51 | V | A | 2.8441 | |
| 52 | L | A | 1.0388 | |
| 53 | R | A | -0.8375 | |
| 54 | G | A | 0.2950 | |
| 55 | L | A | 0.8896 | |
| 56 | A | A | -1.2843 | |
| 57 | K | A | -2.8563 | |
| 58 | D | A | -3.1906 | |
| 59 | G | A | -2.5018 | |
| 60 | K | A | -2.2932 | |
| 61 | F | A | -0.3788 | |
| 62 | A | A | -0.6595 | |
| 63 | A | A | -0.5353 | |
| 64 | A | A | -0.8201 | |
| 65 | E | A | -1.9484 | |
| 66 | A | A | -1.6895 | |
| 67 | A | A | -1.9853 | |
| 68 | A | A | -2.6308 | |
| 69 | K | A | -3.9346 | |
| 70 | Q | A | -4.0134 | |
| 71 | N | A | -3.9342 | |
| 72 | K | A | -4.0528 | |
| 73 | N | A | -3.3299 | |
| 74 | D | A | -2.9045 | |
| 75 | Q | A | -1.9268 | |
| 76 | I | A | -0.4997 | |
| 77 | A | A | -0.4685 | |
| 78 | A | A | 0.0000 | |
| 79 | A | A | 0.0000 | |
| 80 | I | A | 0.3978 | |
| 81 | V | A | 0.0000 | |
| 82 | L | A | 0.0000 | |
| 83 | R | A | -1.1401 | |
| 84 | G | A | 0.0000 | |
| 85 | L | A | 0.0000 | |
| 86 | A | A | -1.8108 | |
| 87 | K | A | -2.3644 | |
| 88 | G | A | -1.7722 | |
| 89 | G | A | -1.4006 | |
| 90 | K | A | -1.5269 | |
| 91 | F | A | -0.4118 | |
| 92 | A | A | -0.5120 | |
| 93 | N | A | -1.9287 | |
| 94 | A | A | 0.0000 | |
| 95 | E | A | -1.3483 | |
| 96 | A | A | -1.6617 | |
| 97 | A | A | 0.0000 | |
| 98 | A | A | -2.4581 | |
| 99 | K | A | -3.5823 | |
| 100 | K | A | -3.3779 | |
| 101 | K | A | -3.2158 | |
| 102 | K | A | -3.8687 | |
| 103 | N | A | -3.4891 | |
| 104 | D | A | -3.2039 | |
| 105 | Q | A | -2.4799 | |
| 106 | I | A | -1.2985 | |
| 107 | A | A | -0.6402 | |
| 108 | A | A | 0.0430 | |
| 109 | A | A | 0.0000 | |
| 110 | L | A | 1.3783 | |
| 111 | V | A | 2.8690 | |
| 112 | L | A | 2.7967 | |
| 113 | R | A | 0.0000 | |
| 114 | G | A | 0.0000 | |
| 115 | V | A | 2.1783 | |
| 116 | A | A | 1.2855 | |
| 117 | K | A | 0.0000 | |
| 118 | S | A | -0.2250 | |
| 119 | G | A | -0.1944 | |
| 120 | K | A | 0.1190 | |
| 121 | F | A | 1.1928 | |
| 122 | A | A | 0.4997 | |
| 123 | G | A | 0.3737 | |
| 124 | A | A | -0.0201 | |
| 125 | E | A | -0.7175 | |
| 126 | A | A | 0.0000 | |
| 127 | A | A | 0.0520 | |
| 128 | A | A | -1.1181 | |
| 129 | K | A | -2.1035 | |
| 130 | I | A | 0.0000 | |
| 131 | T | A | -1.3231 | |
| 132 | R | A | -2.7299 | |
| 133 | N | A | -2.0113 | |
| 134 | D | A | 0.0000 | |
| 135 | E | A | -0.1943 | |
| 136 | I | A | 0.0000 | |
| 137 | A | A | 0.2578 | |
| 138 | A | A | 0.0000 | |
| 139 | A | A | 0.0000 | |
| 140 | I | A | 1.0577 | |
| 141 | V | A | 0.3784 | |
| 142 | L | A | 0.0000 | |
| 143 | R | A | -0.7961 | |
| 144 | G | A | -1.1752 | |
| 145 | M | A | -1.1885 | |
| 146 | A | A | -1.2753 | |
| 147 | K | A | -2.4605 | |
| 148 | G | A | -1.8126 | |
| 149 | G | A | -1.7640 | |
| 150 | R | A | -1.7633 | |
| 151 | F | A | 0.4290 | |
| 152 | F | A | 0.3061 | |
| 153 | A | A | 0.0000 | |
| 154 | S | A | -0.6749 | |
| 155 | E | A | -0.8814 | |
| 156 | A | A | 0.0000 | |
| 157 | A | A | 0.0000 | |
| 158 | A | A | -1.8037 | |
| 159 | K | A | -1.9470 | |
| 160 | M | A | 0.0000 | |
| 161 | K | A | -3.0163 | |
| 162 | K | A | -2.8742 | |
| 163 | D | A | -2.2626 | |
| 164 | D | A | -1.5357 | |
| 165 | Q | A | -0.8435 | |
| 166 | I | A | 0.0000 | |
| 167 | A | A | 0.0000 | |
| 168 | A | A | 0.0000 | |
| 169 | A | A | 0.0000 | |
| 170 | I | A | 0.0000 | |
| 171 | A | A | -0.3021 | |
| 172 | L | A | 0.0000 | |
| 173 | R | A | 0.0000 | |
| 174 | G | A | -1.8968 | |
| 175 | M | A | -1.4234 | |
| 176 | A | A | -1.6801 | |
| 177 | K | A | -3.1166 | |
| 178 | D | A | -3.2447 | |
| 179 | G | A | -2.8308 | |
| 180 | K | A | -2.5077 | |
| 181 | F | A | -0.7115 | |
| 182 | A | A | -0.3103 | |
| 183 | V | A | -0.1590 | |
| 184 | K | A | -2.0611 | |
| 185 | G | A | -1.3873 | |
| 186 | G | A | -1.5487 | |
| 187 | G | A | -1.4345 |