| Chain sequence(s) |
A: MAQVQLLESGGGLVQPGGSLRLSCAASGFRVSNYDMGWVRQAPGKGLEWVSSIETPSGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAGLCQIVPGSYPWQPNTLEFWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:08)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:08)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:08)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:08)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:08)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:50)
[INFO] Main: Simulation completed successfully. (00:01:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.8052 | |
| 2 | A | A | -0.0489 | |
| 3 | Q | A | -0.8929 | |
| 4 | V | A | -0.3959 | |
| 5 | Q | A | -0.5680 | |
| 6 | L | A | 0.0000 | |
| 7 | L | A | 0.9305 | |
| 8 | E | A | 0.2241 | |
| 9 | S | A | -0.3469 | |
| 10 | G | A | -0.8062 | |
| 11 | G | A | 0.0682 | |
| 12 | G | A | 0.6165 | |
| 13 | L | A | 1.3322 | |
| 14 | V | A | 0.0000 | |
| 15 | Q | A | -1.3846 | |
| 16 | P | A | -1.5003 | |
| 17 | G | A | -1.3174 | |
| 18 | G | A | -0.9091 | |
| 19 | S | A | -1.2985 | |
| 20 | L | A | -0.9896 | |
| 21 | R | A | -2.2641 | |
| 22 | L | A | 0.0000 | |
| 23 | S | A | -0.5463 | |
| 24 | C | A | 0.0000 | |
| 25 | A | A | -0.2919 | |
| 26 | A | A | 0.0000 | |
| 27 | S | A | -0.7005 | |
| 28 | G | A | -0.7665 | |
| 29 | F | A | -1.1732 | |
| 30 | R | A | -2.5212 | |
| 31 | V | A | 0.0000 | |
| 32 | S | A | -1.7797 | |
| 33 | N | A | -1.6979 | |
| 34 | Y | A | -0.6541 | |
| 35 | D | A | 0.0000 | |
| 36 | M | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | W | A | 0.0000 | |
| 39 | V | A | 0.0000 | |
| 40 | R | A | 0.0000 | |
| 41 | Q | A | -0.7113 | |
| 42 | A | A | -1.1192 | |
| 43 | P | A | -1.3094 | |
| 44 | G | A | -1.5709 | |
| 45 | K | A | -2.2647 | |
| 46 | G | A | -1.3384 | |
| 47 | L | A | -0.5572 | |
| 48 | E | A | -0.9975 | |
| 49 | W | A | 0.0000 | |
| 50 | V | A | 0.0000 | |
| 51 | S | A | 0.0000 | |
| 52 | S | A | 0.0000 | |
| 53 | I | A | 0.0000 | |
| 54 | E | A | -0.2843 | |
| 55 | T | A | -0.5425 | |
| 56 | P | A | -0.6056 | |
| 57 | S | A | -0.5362 | |
| 58 | G | A | -0.5340 | |
| 59 | S | A | -0.2911 | |
| 60 | T | A | 0.0447 | |
| 61 | Y | A | 0.0490 | |
| 62 | Y | A | -0.6882 | |
| 63 | A | A | -1.3229 | |
| 64 | D | A | -2.4548 | |
| 65 | S | A | -1.7065 | |
| 66 | V | A | 0.0000 | |
| 67 | K | A | -2.5540 | |
| 68 | G | A | -1.7520 | |
| 69 | R | A | -1.5635 | |
| 70 | F | A | 0.0000 | |
| 71 | T | A | -0.8927 | |
| 72 | I | A | 0.0000 | |
| 73 | S | A | -0.6275 | |
| 74 | R | A | -1.2807 | |
| 75 | D | A | -2.0156 | |
| 76 | N | A | -2.7090 | |
| 77 | S | A | -2.0720 | |
| 78 | K | A | -2.6913 | |
| 79 | N | A | -2.2261 | |
| 80 | T | A | 0.0000 | |
| 81 | L | A | 0.0000 | |
| 82 | Y | A | -0.7717 | |
| 83 | L | A | 0.0000 | |
| 84 | Q | A | -1.5819 | |
| 85 | M | A | 0.0000 | |
| 86 | N | A | -1.3761 | |
| 87 | S | A | -1.1409 | |
| 88 | L | A | 0.0000 | |
| 89 | R | A | -2.0693 | |
| 90 | A | A | -1.6264 | |
| 91 | E | A | -2.1934 | |
| 92 | D | A | 0.0000 | |
| 93 | T | A | -0.3848 | |
| 94 | A | A | 0.0000 | |
| 95 | V | A | 0.8130 | |
| 96 | Y | A | 0.0000 | |
| 97 | Y | A | 0.4270 | |
| 98 | C | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | G | A | 0.0000 | |
| 101 | L | A | 0.0000 | |
| 102 | C | A | -0.0885 | |
| 103 | Q | A | -0.1898 | |
| 104 | I | A | 1.0632 | |
| 105 | V | A | 1.5590 | |
| 106 | P | A | 0.4125 | |
| 107 | G | A | -0.1015 | |
| 108 | S | A | 0.0561 | |
| 109 | Y | A | -0.0099 | |
| 110 | P | A | -0.6504 | |
| 111 | W | A | 0.0000 | |
| 112 | Q | A | -1.6681 | |
| 113 | P | A | -1.4168 | |
| 114 | N | A | -1.7817 | |
| 115 | T | A | -1.3874 | |
| 116 | L | A | 0.0000 | |
| 117 | E | A | -1.2781 | |
| 118 | F | A | -0.0796 | |
| 119 | W | A | 0.0890 | |
| 120 | G | A | -0.0319 | |
| 121 | Q | A | -0.8767 | |
| 122 | G | A | 0.0308 | |
| 123 | T | A | 0.5420 | |
| 124 | L | A | 1.6815 | |
| 125 | V | A | 0.0000 | |
| 126 | T | A | 0.3470 | |
| 127 | V | A | 0.0000 | |
| 128 | S | A | -0.7598 | |
| 129 | S | A | -0.5188 |