Project name: d6da7457d2f4c8

Status: done

Started: 2025-06-25 13:47:36
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Chain sequence(s) A: MRRWCYRKCYKGYCYRKCRGGSSRSSSPQRVNGKVKGRIFVGSSQVPIVFENTDLASYVVMNHGNSYTAISTIPETVGYSLLPLAPVGGIIGWMFAVEQDGFKNGFSITGGEFTRQAEVTFVGHPGNLVIKQRFSGIDEHGHLTIDTELEGRVPQIPFGSSVHIEPYTELYHYSTSVITSSSTREYTVTEPERDGASPSRIYTYQWRQTITFQECVHDDSRPALPSTQQLSVDSVSVLYNQEEKILAYALSNSIGPVREGSPDAKHHHHHH
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:34)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:36)
Show buried residues

Minimal score value
-3.8903
Maximal score value
1.366
Average score
-0.7899
Total score value
-214.0628

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A -0.3613
2 R A -1.8694
3 R A -2.4643
4 W A 0.0000
5 C A -1.4972
6 Y A -1.3984
7 R A -1.9055
8 K A -1.7123
9 C A -0.1291
10 Y A 0.7051
11 K A -0.7644
12 G A -0.1007
13 Y A 0.8290
14 C A -0.1955
15 Y A -0.4856
16 R A -2.3616
17 K A -2.2727
18 C A -1.6350
19 R A -1.8559
20 G A -1.8201
21 G A -1.6264
22 S A -1.3591
23 S A -1.2529
24 R A -2.3403
25 S A -1.9232
26 S A -1.0861
27 S A -1.0176
28 P A -0.5429
29 Q A 0.0000
30 R A -0.6336
31 V A 0.0000
32 N A -1.3263
33 G A -2.0341
34 K A -3.3538
35 V A 0.0000
36 K A -3.1682
37 G A 0.0000
38 R A -1.4308
39 I A 0.0000
40 F A -0.1386
41 V A 0.0000
42 G A -0.9337
43 S A -0.6171
44 S A -0.2774
45 Q A -0.3639
46 V A 1.2932
47 P A 0.5791
48 I A 0.8303
49 V A 0.2267
50 F A 0.0000
51 E A -3.3211
52 N A -3.2916
53 T A 0.0000
54 D A -3.1116
55 L A 0.0000
56 A A -0.7152
57 S A 0.0000
58 Y A 0.4511
59 V A 0.0000
60 V A -0.3004
61 M A 0.0000
62 N A -1.6893
63 H A -1.4890
64 G A 0.0000
65 N A -0.6111
66 S A 0.0000
67 Y A 0.5446
68 T A 0.0000
69 A A 0.1441
70 I A 0.0000
71 S A -1.2230
72 T A -1.3513
73 I A 0.0000
74 P A -0.3502
75 E A -1.1329
76 T A -0.2899
77 V A 0.0000
78 G A 0.0000
79 Y A 0.0000
80 S A 0.0000
81 L A 0.0000
82 L A 0.0000
83 P A 0.0000
84 L A 0.0000
85 A A 0.0000
86 P A 0.0000
87 V A 0.0000
88 G A 0.0000
89 G A -0.0053
90 I A 0.0000
91 I A 0.0000
92 G A 0.0000
93 W A 0.0000
94 M A 0.0000
95 F A 0.0000
96 A A 0.0000
97 V A -0.5186
98 E A 0.0000
99 Q A -1.3403
100 D A -2.1826
101 G A -1.4388
102 F A -0.8524
103 K A -0.7715
104 N A 0.0000
105 G A 0.0000
106 F A 0.0000
107 S A -0.3376
108 I A 0.0000
109 T A 0.0000
110 G A 0.0000
111 G A 0.0000
112 E A -2.5201
113 F A 0.0000
114 T A -1.7374
115 R A 0.0000
116 Q A -2.2483
117 A A 0.0000
118 E A -2.2968
119 V A 0.0000
120 T A -0.8338
121 F A 0.0000
122 V A 0.9261
123 G A -0.0075
124 H A -0.5734
125 P A -0.7613
126 G A -0.7978
127 N A -1.0888
128 L A 0.0000
129 V A -1.3660
130 I A 0.0000
131 K A -2.1827
132 Q A 0.0000
133 R A -2.8919
134 F A 0.0000
135 S A -1.5377
136 G A 0.0000
137 I A -1.2749
138 D A -2.2983
139 E A -2.8428
140 H A -2.3656
141 G A -1.7369
142 H A -1.4779
143 L A 0.0000
144 T A -1.4328
145 I A 0.0000
146 D A -2.5454
147 T A 0.0000
148 E A -2.4649
149 L A 0.0000
150 E A -2.0402
151 G A -1.2497
152 R A -1.2564
153 V A 0.0000
154 P A 0.0000
155 Q A -1.0443
156 I A 0.0000
157 P A 0.0410
158 F A 0.7391
159 G A -0.3089
160 S A 0.0000
161 S A -0.1371
162 V A 0.0000
163 H A -1.3583
164 I A 0.0000
165 E A -2.6259
166 P A -1.7522
167 Y A -0.9184
168 T A -0.2489
169 E A 0.0000
170 L A 0.0000
171 Y A 0.0000
172 H A -0.3069
173 Y A -0.0650
174 S A -0.1192
175 T A 0.0358
176 S A -0.1147
177 V A 0.1647
178 I A 0.0000
179 T A -0.5172
180 S A 0.0000
181 S A -1.1598
182 S A 0.0000
183 T A -0.7602
184 R A 0.0000
185 E A -1.6726
186 Y A 0.0000
187 T A -1.1430
188 V A 0.0000
189 T A -1.3255
190 E A -1.6753
191 P A -1.9647
192 E A -3.5565
193 R A -3.8903
194 D A -3.3324
195 G A -2.4402
196 A A -2.1459
197 S A -2.0264
198 P A -1.5824
199 S A -1.1485
200 R A -1.5022
201 I A -0.2484
202 Y A 0.1805
203 T A 0.0279
204 Y A 0.0000
205 Q A -1.3105
206 W A 0.0000
207 R A -2.5681
208 Q A 0.0000
209 T A -0.9864
210 I A 0.0000
211 T A -0.7874
212 F A 0.0000
213 Q A -1.6000
214 E A -0.7214
215 C A 0.0000
216 V A 0.7637
217 H A -0.5459
218 D A -1.2275
219 D A -2.0652
220 S A -1.5059
221 R A -1.1387
222 P A -0.7604
223 A A -0.3654
224 L A -0.0831
225 P A -0.2157
226 S A -0.2665
227 T A -0.0190
228 Q A 0.0000
229 Q A 0.0000
230 L A 0.0000
231 S A -0.3255
232 V A 0.0000
233 D A -1.5624
234 S A -1.0382
235 V A -0.8985
236 S A -0.2023
237 V A 0.6598
238 L A 1.3660
239 Y A 0.0000
240 N A -1.4205
241 Q A -2.1049
242 E A -3.2051
243 E A -3.1230
244 K A -2.1833
245 I A -0.9275
246 L A 0.0000
247 A A 0.6631
248 Y A 0.0000
249 A A 0.2627
250 L A 0.0000
251 S A -0.6531
252 N A 0.0000
253 S A -0.3455
254 I A 0.0000
255 G A 0.0000
256 P A -0.5310
257 V A -0.2438
258 R A -1.9661
259 E A -2.7703
260 G A -1.9476
261 S A 0.0000
262 P A -1.4248
263 D A 0.0000
264 A A -2.1461
265 K A -3.3379
266 H A -3.0891
267 H A -3.1620
268 H A -3.2599
269 H A -3.1276
270 H A -2.6706
271 H A -2.1634
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Laboratory of Theory of Biopolymers 2018