Chain sequence(s) |
A: RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 5 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:47) [INFO] Main: Simulation completed successfully. (00:00:47) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | R | A | -1.8677 | |
2 | P | A | -0.8016 | |
3 | D | A | -1.7570 | |
4 | F | A | -0.0077 | |
5 | C | A | 0.0000 | |
6 | L | A | 1.5034 | |
7 | E | A | 0.0220 | |
8 | P | A | -0.3148 | |
9 | P | A | -0.0872 | |
10 | Y | A | 0.3882 | |
11 | T | A | 0.0050 | |
12 | G | A | -0.1256 | |
13 | P | A | -0.1246 | |
14 | C | A | -0.0113 | |
15 | K | A | -1.6358 | |
16 | A | A | -0.6277 | |
17 | R | A | -1.7183 | |
18 | I | A | 0.6464 | |
19 | I | A | 2.0947 | |
20 | R | A | 0.0035 | |
21 | Y | A | 0.2507 | |
22 | F | A | 0.0000 | |
23 | Y | A | 0.0000 | |
24 | N | A | -0.2906 | |
25 | A | A | -0.3993 | |
26 | K | A | -1.6872 | |
27 | A | A | -0.3435 | |
28 | G | A | -0.1985 | |
29 | L | A | 1.3028 | |
30 | C | A | 0.2145 | |
31 | Q | A | -0.6839 | |
32 | T | A | -0.1118 | |
33 | F | A | 0.2643 | |
34 | V | A | 0.6643 | |
35 | Y | A | 0.0000 | |
36 | G | A | 0.0000 | |
37 | G | A | -0.3083 | |
38 | C | A | -0.2418 | |
39 | R | A | -1.8050 | |
40 | A | A | -0.4623 | |
41 | K | A | -1.2774 | |
42 | R | A | -2.0178 | |
43 | N | A | 0.0000 | |
44 | N | A | -0.1283 | |
45 | F | A | -0.1296 | |
46 | K | A | -1.6693 | |
47 | S | A | -0.3393 | |
48 | A | A | -0.2952 | |
49 | E | A | -1.7251 | |
50 | D | A | -0.9105 | |
51 | C | A | 0.0000 | |
52 | M | A | 0.4471 | |
53 | R | A | -1.6983 | |
54 | T | A | -0.3723 | |
55 | C | A | 0.0000 | |
56 | G | A | -0.3531 |