Project name: query_structure

Status: done

Started: 2026-03-16 23:50:03
Settings
Chain sequence(s) A: KIPCGESCVYIPCISSVLGCSCSNKVCYKD
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:13)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:13)
Show buried residues

Minimal score value
-2.4664
Maximal score value
2.758
Average score
0.2906
Total score value
8.7176

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -1.6861
2 I A 0.3979
3 P A -0.0175
4 C A 0.1659
5 G A -0.3005
6 E A 0.0937
7 S A 0.3271
8 C A 0.8897
9 V A 1.1661
10 Y A 2.0707
11 I A 2.2240
12 P A 1.3439
13 C A 0.0000
14 I A 2.6704
15 S A 1.8088
16 S A 1.6372
17 V A 2.7580
18 L A 2.3130
19 G A 0.4588
20 C A 0.0000
21 S A -0.3828
22 C A -0.0400
23 S A -0.8888
24 N A -1.6484
25 K A -1.3313
26 V A -0.6158
27 C A 0.0000
28 Y A -0.8670
29 K A -1.3630
30 D A -2.4664
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Laboratory of Theory of Biopolymers 2018