| Chain sequence(s) |
I: VVYTDCTESGQNLCLCEGSNVCGQGNKCILGSDGEKNQCVTGEGTPKPQSHNDGDFEEIPEEYLQ
input PDB |
| Selected Chain(s) | I |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with I chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:49)
[INFO] Main: Simulation completed successfully. (00:00:50)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | I | 2.7494 | |
| 2 | V | I | 2.9497 | |
| 3 | Y | I | 1.4586 | |
| 4 | T | I | -0.1060 | |
| 5 | D | I | -2.1628 | |
| 6 | C | I | 0.0000 | |
| 7 | T | I | -1.4033 | |
| 8 | E | I | -2.1006 | |
| 9 | S | I | -0.9815 | |
| 10 | G | I | -1.0044 | |
| 11 | Q | I | 0.0000 | |
| 12 | N | I | 0.0000 | |
| 13 | L | I | -0.3793 | |
| 14 | C | I | 0.0000 | |
| 15 | L | I | -0.7880 | |
| 16 | C | I | 0.0000 | |
| 17 | E | I | -2.4015 | |
| 18 | G | I | -2.0298 | |
| 19 | S | I | -1.3945 | |
| 20 | N | I | -1.6397 | |
| 21 | V | I | -0.2967 | |
| 22 | C | I | 0.0000 | |
| 23 | G | I | -0.9772 | |
| 24 | Q | I | -1.8922 | |
| 25 | G | I | -1.8653 | |
| 26 | N | I | -1.5865 | |
| 27 | K | I | -1.4827 | |
| 28 | C | I | 0.0000 | |
| 29 | I | I | -0.4489 | |
| 30 | L | I | -1.1694 | |
| 31 | G | I | -2.0446 | |
| 32 | S | I | -2.0019 | |
| 33 | D | I | -2.9322 | |
| 34 | G | I | -2.7249 | |
| 35 | E | I | -3.6857 | |
| 36 | K | I | -3.5073 | |
| 37 | N | I | -2.1343 | |
| 38 | Q | I | -1.9266 | |
| 39 | C | I | -0.8883 | |
| 40 | V | I | -0.4336 | |
| 41 | T | I | -0.8822 | |
| 42 | G | I | -1.4546 | |
| 43 | E | I | -2.5568 | |
| 44 | G | I | -1.6232 | |
| 45 | T | I | -1.2361 | |
| 46 | P | I | -1.2137 | |
| 47 | K | I | -1.3281 | |
| 48 | P | I | -1.2274 | |
| 49 | Q | I | -2.0020 | |
| 50 | S | I | -1.5917 | |
| 51 | H | I | -2.5829 | |
| 52 | N | I | -2.9339 | |
| 53 | D | I | -2.9650 | |
| 54 | G | I | -2.2936 | |
| 55 | D | I | -2.1765 | |
| 56 | F | I | -0.5879 | |
| 57 | E | I | -2.0474 | |
| 58 | E | I | -2.2632 | |
| 59 | I | I | -0.6146 | |
| 60 | P | I | -1.2967 | |
| 61 | E | I | -2.4307 | |
| 62 | E | I | -1.8363 | |
| 63 | Y | I | 0.3569 | |
| 64 | L | I | 0.1053 | |
| 65 | Q | I | -1.0776 |