| Chain sequence(s) |
A: MAQVQLVESGGGLVQAGGSLRLSCAASGRTFSNYAMGWFRQAPGKEREFVAAISWTGVSTYYADSVKGRFTISRDNDKNTVYVQMNSLIPEDTAIYYCAAVRARSFSDTYSRVNEYDYWGQGTQVTV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:59)
[INFO] Main: Simulation completed successfully. (00:01:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7734 | |
| 2 | A | A | -0.3694 | |
| 3 | Q | A | -1.0629 | |
| 4 | V | A | -0.8397 | |
| 5 | Q | A | -0.7670 | |
| 6 | L | A | 0.0000 | |
| 7 | V | A | 1.2116 | |
| 8 | E | A | 0.0684 | |
| 9 | S | A | -0.5056 | |
| 10 | G | A | -1.0641 | |
| 11 | G | A | -0.8161 | |
| 12 | G | A | 0.0448 | |
| 13 | L | A | 1.2227 | |
| 14 | V | A | 0.5004 | |
| 15 | Q | A | -0.6553 | |
| 16 | A | A | -0.5006 | |
| 17 | G | A | -0.7140 | |
| 18 | G | A | -0.4663 | |
| 19 | S | A | -0.9423 | |
| 20 | L | A | -0.9489 | |
| 21 | R | A | -2.1292 | |
| 22 | L | A | 0.0000 | |
| 23 | S | A | -0.4308 | |
| 24 | C | A | 0.0000 | |
| 25 | A | A | -0.1316 | |
| 26 | A | A | -0.6565 | |
| 27 | S | A | -1.0403 | |
| 28 | G | A | -1.6083 | |
| 29 | R | A | -2.2910 | |
| 30 | T | A | -1.6421 | |
| 31 | F | A | 0.0000 | |
| 32 | S | A | -1.8810 | |
| 33 | N | A | -2.0182 | |
| 34 | Y | A | 0.0000 | |
| 35 | A | A | 0.0000 | |
| 36 | M | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | W | A | 0.0000 | |
| 39 | F | A | 0.0000 | |
| 40 | R | A | 0.0000 | |
| 41 | Q | A | -1.7022 | |
| 42 | A | A | -1.7809 | |
| 43 | P | A | -1.3189 | |
| 44 | G | A | -1.8706 | |
| 45 | K | A | -3.0880 | |
| 46 | E | A | -3.1884 | |
| 47 | R | A | -2.0072 | |
| 48 | E | A | -1.4366 | |
| 49 | F | A | -0.6275 | |
| 50 | V | A | 0.0000 | |
| 51 | A | A | 0.0000 | |
| 52 | A | A | 0.0000 | |
| 53 | I | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | W | A | -0.3156 | |
| 56 | T | A | 0.2400 | |
| 57 | G | A | 0.4618 | |
| 58 | V | A | 1.6740 | |
| 59 | S | A | 0.8373 | |
| 60 | T | A | 0.5665 | |
| 61 | Y | A | 0.0173 | |
| 62 | Y | A | -0.6459 | |
| 63 | A | A | -1.2725 | |
| 64 | D | A | -2.4080 | |
| 65 | S | A | -1.7921 | |
| 66 | V | A | 0.0000 | |
| 67 | K | A | -2.5779 | |
| 68 | G | A | -1.7803 | |
| 69 | R | A | -1.3757 | |
| 70 | F | A | 0.0000 | |
| 71 | T | A | -0.8284 | |
| 72 | I | A | 0.0000 | |
| 73 | S | A | -0.3243 | |
| 74 | R | A | -1.1447 | |
| 75 | D | A | -2.5220 | |
| 76 | N | A | -3.0782 | |
| 77 | D | A | -3.5422 | |
| 78 | K | A | -3.3940 | |
| 79 | N | A | -2.8293 | |
| 80 | T | A | -1.4494 | |
| 81 | V | A | 0.0000 | |
| 82 | Y | A | -0.6571 | |
| 83 | V | A | 0.0000 | |
| 84 | Q | A | -1.2425 | |
| 85 | M | A | 0.0000 | |
| 86 | N | A | -1.1916 | |
| 87 | S | A | -0.7294 | |
| 88 | L | A | 0.0000 | |
| 89 | I | A | -0.0973 | |
| 90 | P | A | -0.7474 | |
| 91 | E | A | -1.5913 | |
| 92 | D | A | 0.0000 | |
| 93 | T | A | -0.4026 | |
| 94 | A | A | 0.0000 | |
| 95 | I | A | -0.4258 | |
| 96 | Y | A | 0.0000 | |
| 97 | Y | A | -0.1591 | |
| 98 | C | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | A | A | 0.0000 | |
| 101 | V | A | 0.0000 | |
| 102 | R | A | -2.2226 | |
| 103 | A | A | -1.7128 | |
| 104 | R | A | -2.5883 | |
| 105 | S | A | -1.9452 | |
| 106 | F | A | 0.0000 | |
| 107 | S | A | -1.3131 | |
| 108 | D | A | -2.4666 | |
| 109 | T | A | -2.1431 | |
| 110 | Y | A | -0.9030 | |
| 111 | S | A | -1.2118 | |
| 112 | R | A | -2.4972 | |
| 113 | V | A | -1.4506 | |
| 114 | N | A | -2.2354 | |
| 115 | E | A | -2.5740 | |
| 116 | Y | A | 0.0000 | |
| 117 | D | A | -1.3287 | |
| 118 | Y | A | -0.4688 | |
| 119 | W | A | 0.0979 | |
| 120 | G | A | -0.0570 | |
| 121 | Q | A | -0.8541 | |
| 122 | G | A | -0.5476 | |
| 123 | T | A | 0.0000 | |
| 124 | Q | A | -0.9739 | |
| 125 | V | A | 0.0000 | |
| 126 | T | A | 0.1982 | |
| 127 | V | A | 0.1856 |