Project name: d74404d644664df

Status: done

Started: 2026-06-27 16:04:43
Settings
Chain sequence(s) A: GGGGSGGGGSGGGGS
B: GGGGSGGGGSGGGGS
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:02)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:02)
Show buried residues

Minimal score value
-1.7636
Maximal score value
-0.7871
Average score
-1.4667
Total score value
-43.9999

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.1540
2 G A -1.5671
3 G A -1.7636
4 G A -1.4613
5 S A -1.3858
6 G A -1.4787
7 G A -1.6038
8 G A -1.7517
9 G A -1.5115
10 S A -1.4523
11 G A -1.4879
12 G A -1.6540
13 G A -1.5519
14 G A -1.3730
15 S A -0.7871
1 G B -1.2533
2 G B -1.5711
3 G B -1.5494
4 G B -1.6077
5 S B -1.3188
6 G B -1.5934
7 G B -1.6490
8 G B -1.5288
9 G B -1.6658
10 S B -1.3667
11 G B -1.5481
12 G B -1.5634
13 G B -1.6775
14 G B -1.2861
15 S B -0.8371
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Laboratory of Theory of Biopolymers 2018