| Chain sequence(s) |
A: GGGGSGGGGSGGGGS
B: GGGGSGGGGSGGGGS input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.1540 | |
| 2 | G | A | -1.5671 | |
| 3 | G | A | -1.7636 | |
| 4 | G | A | -1.4613 | |
| 5 | S | A | -1.3858 | |
| 6 | G | A | -1.4787 | |
| 7 | G | A | -1.6038 | |
| 8 | G | A | -1.7517 | |
| 9 | G | A | -1.5115 | |
| 10 | S | A | -1.4523 | |
| 11 | G | A | -1.4879 | |
| 12 | G | A | -1.6540 | |
| 13 | G | A | -1.5519 | |
| 14 | G | A | -1.3730 | |
| 15 | S | A | -0.7871 | |
| 1 | G | B | -1.2533 | |
| 2 | G | B | -1.5711 | |
| 3 | G | B | -1.5494 | |
| 4 | G | B | -1.6077 | |
| 5 | S | B | -1.3188 | |
| 6 | G | B | -1.5934 | |
| 7 | G | B | -1.6490 | |
| 8 | G | B | -1.5288 | |
| 9 | G | B | -1.6658 | |
| 10 | S | B | -1.3667 | |
| 11 | G | B | -1.5481 | |
| 12 | G | B | -1.5634 | |
| 13 | G | B | -1.6775 | |
| 14 | G | B | -1.2861 | |
| 15 | S | B | -0.8371 |