Project name: hIGF2 [mutate: FR19A, VA20A, YD27A, FN28A]

Status: done

Started: 2025-08-11 08:19:22
Settings
Chain sequence(s) A: AYRPSETLCGGELVDTLQFVCGDRGFYFSRPASRVSRRSRGIVEECCFRSCDLALLETYCATPAKSE
input PDB
Selected Chain(s) A
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues VA20A,FN28A,FR19A,YD27A
Energy difference between WT (input) and mutated protein (by FoldX) 1.65817 kcal/mol

CAUTION: Your mutation/s can destabilize the protein structure

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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:00:20)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:45)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:04)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:05)
Show buried residues

Minimal score value
-2.2212
Maximal score value
1.4137
Average score
-0.5432
Total score value
-36.3941

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A 0.2179
2 Y A 0.5640
3 R A -1.7313
4 P A -0.6309
5 S A -0.5920
6 E A -1.8715
7 T A -0.3521
8 L A 0.3145
9 C A 0.3476
10 G A -0.4874
11 G A -0.8910
12 E A -1.9067
13 L A 0.0000
14 V A 0.4427
15 D A -1.4781
16 T A -0.2729
17 L A 0.0000
18 Q A -1.7117
19 R A -1.9884 mutated: FR19A
20 A A -0.3119 mutated: VA20A
21 C A 0.0000
22 G A -0.5360
23 D A -2.1116
24 R A -1.9125
25 G A -0.3910
26 F A 0.0494
27 D A -1.8149 mutated: YD27A
28 N A -0.9003 mutated: FN28A
29 S A -0.4442
30 R A -0.7922
31 P A -0.3733
32 A A -0.2358
33 S A -0.4255
34 R A -1.5303
35 V A 1.3892
36 S A -0.2382
37 R A -2.2212
38 R A -2.2026
39 S A -0.5543
40 R A -0.4408
41 G A -0.1592
42 I A 0.3115
43 V A 0.0958
44 E A -1.5096
45 E A 0.0000
46 C A 0.0000
47 C A 0.6307
48 F A 1.4137
49 R A -1.5187
50 S A -0.4419
51 C A 0.0000
52 D A -1.0004
53 L A 0.6837
54 A A 0.0396
55 L A 0.1807
56 L A 0.0000
57 E A -1.8262
58 T A -0.4028
59 Y A 0.0000
60 C A 0.2277
61 A A 0.0671
62 T A -0.1164
63 P A -0.2638
64 A A -0.3362
65 K A -1.7345
66 S A -0.8512
67 E A -1.8584
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Laboratory of Theory of Biopolymers 2018