Chain sequence(s) |
A: AYRPSETLCGGELVDTLQFVCGDRGFYFSRPASRVSRRSRGIVEECCFRSCDLALLETYCATPAKSE
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 5 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | VA20A,FN28A,FR19A,YD27A |
Energy difference between WT (input) and mutated protein (by FoldX) | 1.65817 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:20) [INFO] FoldX: Starting FoldX energy minimalization (00:00:45) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:04) [INFO] Main: Simulation completed successfully. (00:01:05) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | A | A | 0.2179 | |
2 | Y | A | 0.5640 | |
3 | R | A | -1.7313 | |
4 | P | A | -0.6309 | |
5 | S | A | -0.5920 | |
6 | E | A | -1.8715 | |
7 | T | A | -0.3521 | |
8 | L | A | 0.3145 | |
9 | C | A | 0.3476 | |
10 | G | A | -0.4874 | |
11 | G | A | -0.8910 | |
12 | E | A | -1.9067 | |
13 | L | A | 0.0000 | |
14 | V | A | 0.4427 | |
15 | D | A | -1.4781 | |
16 | T | A | -0.2729 | |
17 | L | A | 0.0000 | |
18 | Q | A | -1.7117 | |
19 | R | A | -1.9884 | mutated: FR19A |
20 | A | A | -0.3119 | mutated: VA20A |
21 | C | A | 0.0000 | |
22 | G | A | -0.5360 | |
23 | D | A | -2.1116 | |
24 | R | A | -1.9125 | |
25 | G | A | -0.3910 | |
26 | F | A | 0.0494 | |
27 | D | A | -1.8149 | mutated: YD27A |
28 | N | A | -0.9003 | mutated: FN28A |
29 | S | A | -0.4442 | |
30 | R | A | -0.7922 | |
31 | P | A | -0.3733 | |
32 | A | A | -0.2358 | |
33 | S | A | -0.4255 | |
34 | R | A | -1.5303 | |
35 | V | A | 1.3892 | |
36 | S | A | -0.2382 | |
37 | R | A | -2.2212 | |
38 | R | A | -2.2026 | |
39 | S | A | -0.5543 | |
40 | R | A | -0.4408 | |
41 | G | A | -0.1592 | |
42 | I | A | 0.3115 | |
43 | V | A | 0.0958 | |
44 | E | A | -1.5096 | |
45 | E | A | 0.0000 | |
46 | C | A | 0.0000 | |
47 | C | A | 0.6307 | |
48 | F | A | 1.4137 | |
49 | R | A | -1.5187 | |
50 | S | A | -0.4419 | |
51 | C | A | 0.0000 | |
52 | D | A | -1.0004 | |
53 | L | A | 0.6837 | |
54 | A | A | 0.0396 | |
55 | L | A | 0.1807 | |
56 | L | A | 0.0000 | |
57 | E | A | -1.8262 | |
58 | T | A | -0.4028 | |
59 | Y | A | 0.0000 | |
60 | C | A | 0.2277 | |
61 | A | A | 0.0671 | |
62 | T | A | -0.1164 | |
63 | P | A | -0.2638 | |
64 | A | A | -0.3362 | |
65 | K | A | -1.7345 | |
66 | S | A | -0.8512 | |
67 | E | A | -1.8584 |