| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFSDIVVNGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPVHGGPDDRVPFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRSGPVGAPLPAAPPPSPLYTPPPATSPYAVPPPYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPKDNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9483 | |
| 2 | L | A | 1.9696 | |
| 3 | P | A | 0.6499 | |
| 4 | P | A | 0.3640 | |
| 5 | T | A | 0.1152 | |
| 6 | T | A | 0.1304 | |
| 7 | P | A | 0.1853 | |
| 8 | V | A | 1.2153 | |
| 9 | A | A | 0.0228 | |
| 10 | K | A | -1.1791 | |
| 11 | V | A | -0.4571 | |
| 12 | Q | A | -1.5588 | |
| 13 | S | A | -1.6125 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3856 | |
| 16 | E | A | -2.4231 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4639 | |
| 20 | P | A | 0.1130 | |
| 21 | T | A | 0.1131 | |
| 22 | S | A | -0.1707 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0985 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2854 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8681 | |
| 31 | R | A | -2.6326 | |
| 32 | L | A | -0.7637 | |
| 33 | L | A | 1.2204 | |
| 34 | T | A | 1.6380 | |
| 35 | V | A | 1.9859 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.2318 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | 0.1353 | |
| 40 | S | A | -0.2858 | |
| 41 | D | A | 0.0512 | |
| 42 | I | A | 1.7956 | |
| 43 | V | A | 2.4816 | |
| 44 | V | A | 1.6878 | |
| 45 | N | A | -0.5240 | |
| 46 | G | A | -0.3476 | |
| 47 | K | A | -0.1134 | |
| 48 | V | A | 2.2294 | |
| 49 | L | A | 2.5741 | |
| 50 | V | A | 1.7357 | |
| 51 | P | A | 0.6681 | |
| 52 | K | A | -0.0946 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1696 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4794 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2697 | |
| 70 | K | A | -1.8168 | |
| 71 | F | A | -0.6754 | |
| 72 | A | A | -0.5998 | |
| 73 | L | A | -0.8945 | |
| 74 | P | A | -1.2732 | |
| 75 | Q | A | -2.4780 | |
| 76 | K | A | -3.0940 | |
| 77 | D | A | -2.9866 | |
| 78 | F | A | -1.6335 | |
| 79 | Y | A | -1.9026 | |
| 80 | D | A | -2.7403 | |
| 81 | P | A | -2.3450 | |
| 82 | E | A | -3.0637 | |
| 83 | K | A | -3.4426 | |
| 84 | E | A | -2.4979 | |
| 85 | R | A | -1.2819 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6231 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9547 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3342 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7161 | |
| 99 | G | A | -0.5318 | |
| 100 | P | A | -0.4106 | |
| 101 | L | A | 0.0250 | |
| 102 | G | A | -0.3205 | |
| 103 | K | A | -0.8701 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4914 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.0887 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.2302 | |
| 110 | L | A | 0.1425 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.2280 | |
| 113 | K | A | -0.5921 | |
| 114 | L | A | -0.9794 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.3512 | |
| 117 | T | A | -1.1705 | |
| 118 | E | A | -2.6693 | |
| 119 | N | A | -2.3887 | |
| 120 | P | A | -1.5198 | |
| 121 | T | A | -0.7592 | |
| 122 | A | A | -0.3757 | |
| 123 | P | A | -0.1611 | |
| 124 | V | A | -0.2770 | |
| 125 | H | A | -0.8960 | |
| 126 | G | A | -1.6093 | |
| 127 | G | A | -1.6665 | |
| 128 | P | A | -1.6096 | |
| 129 | D | A | -2.4459 | |
| 130 | D | A | -1.9461 | |
| 131 | R | A | -1.2882 | |
| 132 | V | A | -0.0658 | |
| 133 | P | A | 0.0552 | |
| 134 | F | A | 0.0830 | |
| 135 | S | A | -0.1569 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7386 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2301 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5674 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2799 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0975 | |
| 157 | D | A | 0.3296 | |
| 158 | I | A | 0.8298 | |
| 159 | A | A | 0.1150 | |
| 160 | E | A | -1.4760 | |
| 161 | P | A | -0.2262 | |
| 162 | C | A | 0.1897 | |
| 163 | P | A | -0.1619 | |
| 164 | G | A | -0.0573 | |
| 165 | L | A | 0.6273 | |
| 166 | P | A | -0.0923 | |
| 167 | P | A | -0.3305 | |
| 168 | G | A | -0.4171 | |
| 169 | A | A | 0.1027 | |
| 170 | C | A | 0.8850 | |
| 171 | P | A | 0.5483 | |
| 172 | P | A | 0.7996 | |
| 173 | I | A | 2.0295 | |
| 174 | Q | A | 0.8404 | |
| 175 | L | A | 1.4546 | |
| 176 | V | A | 0.8145 | |
| 177 | N | A | -0.3602 | |
| 178 | S | A | -0.0224 | |
| 179 | V | A | 0.3516 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3588 | |
| 182 | D | A | 0.0635 | |
| 183 | G | A | -0.1588 | |
| 184 | D | A | -0.5898 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1372 | |
| 190 | F | A | 0.0553 | |
| 191 | G | A | -0.1039 | |
| 192 | N | A | -0.3003 | |
| 193 | M | A | -0.1767 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4331 | |
| 197 | E | A | -2.6175 | |
| 198 | L | A | -1.2254 | |
| 199 | Q | A | -2.5334 | |
| 200 | Q | A | -3.3519 | |
| 201 | D | A | -3.6040 | |
| 202 | R | A | -3.3539 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.4286 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.4178 | |
| 211 | S | A | -1.7898 | |
| 212 | T | A | -1.5253 | |
| 213 | R | A | -2.2472 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1883 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2789 | |
| 220 | L | A | 0.4525 | |
| 221 | K | A | -1.4028 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9118 | |
| 224 | N | A | -1.6842 | |
| 225 | E | A | -1.3403 | |
| 226 | A | A | -0.6867 | |
| 227 | Y | A | -0.4160 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7136 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0974 | |
| 234 | F | A | 0.2866 | |
| 235 | G | A | -0.8013 | |
| 236 | R | A | -2.5904 | |
| 237 | R | A | -2.8681 | |
| 238 | E | A | -2.1367 | |
| 239 | Q | A | -0.1625 | |
| 240 | V | A | 1.5036 | |
| 241 | Y | A | 1.2177 | |
| 242 | A | A | 0.1429 | |
| 243 | R | A | -1.3526 | |
| 244 | H | A | -1.2166 | |
| 245 | F | A | -0.2741 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.6009 | |
| 249 | S | A | -1.1426 | |
| 250 | G | A | -1.0769 | |
| 251 | P | A | -0.5533 | |
| 252 | V | A | -0.2558 | |
| 253 | G | A | -0.4304 | |
| 254 | A | A | -0.0921 | |
| 255 | P | A | -0.0398 | |
| 256 | L | A | 0.6613 | |
| 257 | P | A | 0.2268 | |
| 258 | A | A | -0.0513 | |
| 259 | A | A | -0.0013 | |
| 260 | P | A | -0.5208 | |
| 261 | P | A | -0.3944 | |
| 262 | P | A | -0.2904 | |
| 263 | S | A | 0.2179 | |
| 264 | P | A | 0.4427 | |
| 265 | L | A | 1.6029 | |
| 266 | Y | A | 1.0270 | |
| 267 | T | A | 0.1492 | |
| 268 | P | A | 0.1939 | |
| 269 | P | A | 0.1367 | |
| 270 | P | A | -0.2495 | |
| 271 | A | A | 0.1958 | |
| 272 | T | A | -0.0837 | |
| 273 | S | A | 0.2571 | |
| 274 | P | A | 0.2971 | |
| 275 | Y | A | 1.0811 | |
| 276 | A | A | 1.0461 | |
| 277 | V | A | 1.7849 | |
| 278 | P | A | 0.9508 | |
| 279 | P | A | 0.1317 | |
| 280 | P | A | -0.1069 | |
| 281 | Y | A | 0.2035 | |
| 282 | D | A | -0.3080 | |
| 283 | Y | A | 1.0208 | |
| 284 | F | A | 0.7699 | |
| 285 | G | A | 0.1028 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8902 | |
| 291 | L | A | 1.5795 | |
| 292 | V | A | 0.5706 | |
| 293 | S | A | -0.1568 | |
| 294 | S | A | -0.9599 | |
| 295 | D | A | -1.8444 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1129 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6155 | |
| 301 | R | A | -1.8874 | |
| 302 | P | A | -0.9607 | |
| 303 | F | A | -0.1576 | |
| 304 | W | A | -0.5163 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0746 | |
| 307 | R | A | -2.8184 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.3511 | |
| 310 | G | A | -1.2116 | |
| 311 | N | A | -1.3142 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9332 | |
| 319 | N | A | -0.9027 | |
| 320 | E | A | -1.0643 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3794 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.2135 | |
| 333 | N | A | 0.4054 | |
| 334 | F | A | 1.5037 | |
| 335 | T | A | 0.8100 | |
| 336 | I | A | 0.4294 | |
| 337 | S | A | -1.1118 | |
| 338 | Q | A | -2.0104 | |
| 339 | Q | A | -1.8608 | |
| 340 | L | A | -0.1650 | |
| 341 | S | A | -0.4763 | |
| 342 | T | A | -1.0945 | |
| 343 | P | A | -1.6206 | |
| 344 | K | A | -2.6964 | |
| 345 | D | A | -2.4921 | |
| 346 | N | A | -1.5603 | |
| 347 | V | A | 0.6284 | |
| 348 | Y | A | 1.0824 | |
| 349 | D | A | -0.1367 | |
| 350 | P | A | -0.7876 | |
| 351 | S | A | -0.7112 | |
| 352 | N | A | -0.9620 | |
| 353 | F | A | -1.3361 | |
| 354 | K | A | -2.2070 | |
| 355 | N | A | -1.7893 | |
| 356 | Y | A | 0.0376 | |
| 357 | L | A | 0.6751 | |
| 358 | R | A | 0.9441 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4637 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | 0.0062 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.8739 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6486 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2776 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3299 | |
| 376 | L | A | -1.7671 | |
| 377 | D | A | -2.0649 | |
| 378 | P | A | -1.0775 | |
| 379 | G | A | -1.0258 | |
| 380 | V | A | -0.9352 | |
| 381 | L | A | -0.5467 | |
| 382 | A | A | -0.6626 | |
| 383 | H | A | -0.8552 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3920 | |
| 386 | T | A | -0.5746 | |
| 387 | M | A | -0.3325 | |
| 388 | N | A | -0.8684 | |
| 389 | P | A | -1.2725 | |
| 390 | T | A | -1.5519 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5540 | |
| 393 | E | A | -2.9324 | |
| 394 | N | A | -2.6886 | |
| 395 | W | A | -1.5261 | |
| 396 | N | A | -1.3561 | |
| 397 | L | A | -0.2231 | |
| 398 | G | A | 0.5366 | |
| 399 | F | A | 2.4220 | |
| 400 | V | A | 1.8507 | |
| 401 | P | A | 0.0533 | |
| 402 | P | A | -1.9421 | |
| 403 | K | A | -3.5455 | |
| 404 | E | A | -3.9225 | |
| 405 | R | A | -4.2757 | |
| 406 | E | A | -3.9327 | |
| 407 | D | A | -2.9493 | |
| 408 | P | A | -1.7993 | |
| 409 | Y | A | -0.9986 | |
| 410 | K | A | -2.1030 | |
| 411 | G | A | -0.6408 | |
| 412 | L | A | 0.6560 | |
| 413 | I | A | 1.5709 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4062 | |
| 416 | E | A | -1.6933 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9589 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0942 | |
| 421 | E | A | -2.8233 | |
| 422 | R | A | -2.6444 | |
| 423 | F | A | -1.3283 | |
| 424 | S | A | -1.4764 | |
| 425 | Q | A | -1.7799 | |
| 426 | D | A | -2.8860 | |
| 427 | L | A | -1.9650 | |
| 428 | D | A | -2.7543 | |
| 429 | Q | A | -2.6000 | |
| 430 | F | A | -1.4068 | |
| 431 | A | A | -0.8632 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.4869 | |
| 435 | K | A | -0.6612 | |
| 436 | F | A | 0.2062 | |
| 437 | L | A | 1.0711 | |
| 438 | Y | A | 0.8608 | |
| 439 | Q | A | -0.2467 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine