| Chain sequence(s) |
A: IVKGH
C: IVKGH B: IVKGH E: IVKGH D: IVKGH G: IVKGH F: IVKGH I: IVKGH H: IVKGH K: IVKGH J: IVKGH M: IVKGH L: IVKGH O: IVKGH N: IVKGH Q: IVKGH P: IVKGH S: IVKGH R: IVKGH T: IVKGH input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:13)
[INFO] Main: Simulation completed successfully. (00:05:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 2.7148 | |
| 2 | V | A | 1.2483 | |
| 3 | K | A | -1.5020 | |
| 4 | G | A | -1.7640 | |
| 5 | H | A | -2.1752 | |
| 1 | I | B | 2.1987 | |
| 2 | V | B | 0.7511 | |
| 3 | K | B | -1.5801 | |
| 4 | G | B | -2.0841 | |
| 5 | H | B | -2.8692 | |
| 1 | I | C | 2.2263 | |
| 2 | V | C | 0.5306 | |
| 3 | K | C | -1.8169 | |
| 4 | G | C | -1.8057 | |
| 5 | H | C | -2.0667 | |
| 1 | I | D | 2.3510 | |
| 2 | V | D | 1.3591 | |
| 3 | K | D | -1.4038 | |
| 4 | G | D | -1.7601 | |
| 5 | H | D | -2.1359 | |
| 1 | I | E | 1.6756 | |
| 2 | V | E | 1.2624 | |
| 3 | K | E | -1.2351 | |
| 4 | G | E | -1.4359 | |
| 5 | H | E | -1.9158 | |
| 1 | I | F | 1.8952 | |
| 2 | V | F | 0.4676 | |
| 3 | K | F | -1.8916 | |
| 4 | G | F | -2.2497 | |
| 5 | H | F | -1.9617 | |
| 1 | I | G | 2.0373 | |
| 2 | V | G | 0.0000 | |
| 3 | K | G | -1.2563 | |
| 4 | G | G | -1.5099 | |
| 5 | H | G | -2.3082 | |
| 1 | I | H | 2.0021 | |
| 2 | V | H | 0.0896 | |
| 3 | K | H | -1.7157 | |
| 4 | G | H | -1.8202 | |
| 5 | H | H | -1.6710 | |
| 1 | I | I | 2.0170 | |
| 2 | V | I | 0.7753 | |
| 3 | K | I | -1.6270 | |
| 4 | G | I | -1.4670 | |
| 5 | H | I | -1.5486 | |
| 1 | I | J | 1.8722 | |
| 2 | V | J | 0.3469 | |
| 3 | K | J | -1.6550 | |
| 4 | G | J | -1.7590 | |
| 5 | H | J | -1.4927 | |
| 1 | I | K | 2.3183 | |
| 2 | V | K | 0.7346 | |
| 3 | K | K | -1.9097 | |
| 4 | G | K | -1.8040 | |
| 5 | H | K | -2.1247 | |
| 1 | I | L | 2.0090 | |
| 2 | V | L | 0.4035 | |
| 3 | K | L | -1.9057 | |
| 4 | G | L | -2.0885 | |
| 5 | H | L | -2.1486 | |
| 1 | I | M | 2.3265 | |
| 2 | V | M | 1.0635 | |
| 3 | K | M | -1.4650 | |
| 4 | G | M | -1.7964 | |
| 5 | H | M | -2.1766 | |
| 1 | I | N | 1.5759 | |
| 2 | V | N | -0.0211 | |
| 3 | K | N | -2.1615 | |
| 4 | G | N | -1.9758 | |
| 5 | H | N | -1.8819 | |
| 1 | I | O | 2.3433 | |
| 2 | V | O | 1.1990 | |
| 3 | K | O | -1.2777 | |
| 4 | G | O | -1.5006 | |
| 5 | H | O | -1.9803 | |
| 1 | I | P | 2.0583 | |
| 2 | V | P | 0.5294 | |
| 3 | K | P | -1.0961 | |
| 4 | G | P | -1.6235 | |
| 5 | H | P | -2.0549 | |
| 1 | I | Q | 2.2946 | |
| 2 | V | Q | 0.8398 | |
| 3 | K | Q | -1.1370 | |
| 4 | G | Q | -1.9334 | |
| 5 | H | Q | -2.1161 | |
| 1 | I | R | 2.1311 | |
| 2 | V | R | 0.7767 | |
| 3 | K | R | -1.8845 | |
| 4 | G | R | -2.0559 | |
| 5 | H | R | -1.7810 | |
| 1 | I | S | 2.5918 | |
| 2 | V | S | 1.1189 | |
| 3 | K | S | -1.4791 | |
| 4 | G | S | -1.3118 | |
| 5 | H | S | -1.6248 | |
| 1 | I | T | 2.6114 | |
| 2 | V | T | 1.4499 | |
| 3 | K | T | -1.5953 | |
| 4 | G | T | -2.0212 | |
| 5 | H | T | -2.7250 |