| Chain sequence(s) |
A: MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | CS112A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.988824 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:02:30)
[INFO] FoldX: Starting FoldX energy minimalization (00:02:33)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:34)
[INFO] Main: Simulation completed successfully. (00:03:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.9177 | |
| 2 | A | A | 0.4413 | |
| 3 | T | A | -0.8534 | |
| 4 | K | A | -0.6004 | |
| 5 | A | A | 0.0000 | |
| 6 | V | A | 1.2475 | |
| 7 | C | A | 0.0000 | |
| 8 | V | A | 1.2183 | |
| 9 | L | A | 0.0000 | |
| 10 | K | A | -2.2924 | |
| 11 | G | A | -2.3957 | |
| 12 | D | A | -2.6391 | |
| 13 | G | A | -1.8235 | |
| 14 | P | A | -1.7356 | |
| 15 | V | A | 0.0000 | |
| 16 | Q | A | -2.2611 | |
| 17 | G | A | -0.7618 | |
| 18 | I | A | 1.0538 | |
| 19 | I | A | 0.0000 | |
| 20 | N | A | 0.2772 | |
| 21 | F | A | 0.0000 | |
| 22 | E | A | -1.7575 | |
| 23 | Q | A | 0.0000 | |
| 24 | K | A | -3.1440 | |
| 25 | E | A | -3.1119 | |
| 26 | S | A | -1.9440 | |
| 27 | N | A | -2.2698 | |
| 28 | G | A | -2.0442 | |
| 29 | P | A | -1.9025 | |
| 30 | V | A | 0.0000 | |
| 31 | K | A | -2.0572 | |
| 32 | V | A | 0.0000 | |
| 33 | W | A | -0.5011 | |
| 34 | G | A | -0.1403 | |
| 35 | S | A | -0.9708 | |
| 36 | I | A | 0.0000 | |
| 37 | K | A | -2.5512 | |
| 38 | G | A | -1.8699 | |
| 39 | L | A | 0.0000 | |
| 40 | T | A | -2.1704 | |
| 41 | E | A | -3.0159 | |
| 42 | G | A | -1.2735 | |
| 43 | L | A | -0.1684 | |
| 44 | H | A | 0.0000 | |
| 45 | G | A | 0.0000 | |
| 46 | F | A | 0.0000 | |
| 47 | H | A | 0.0000 | |
| 48 | V | A | 0.0000 | |
| 49 | H | A | 0.0000 | |
| 50 | E | A | -0.0844 | |
| 51 | F | A | 0.7951 | |
| 52 | G | A | 0.0034 | |
| 53 | D | A | -0.7073 | |
| 54 | N | A | -0.7556 | |
| 55 | T | A | -0.6671 | |
| 56 | A | A | -0.4700 | |
| 57 | G | A | -1.2898 | |
| 58 | C | A | -0.7970 | |
| 59 | T | A | -0.5523 | |
| 60 | S | A | -0.3809 | |
| 61 | A | A | 0.0000 | |
| 62 | G | A | -0.1303 | |
| 63 | P | A | -0.4768 | |
| 64 | H | A | 0.0000 | |
| 65 | F | A | 0.0000 | |
| 66 | N | A | -0.8901 | |
| 67 | P | A | -0.6358 | |
| 68 | L | A | -0.4807 | |
| 69 | S | A | -1.1424 | |
| 70 | R | A | -2.9020 | |
| 71 | K | A | -3.3262 | |
| 72 | H | A | 0.0000 | |
| 73 | G | A | 0.0000 | |
| 74 | G | A | 0.0000 | |
| 75 | P | A | -1.5816 | |
| 76 | K | A | -2.5420 | |
| 77 | D | A | -2.7115 | |
| 78 | E | A | -3.4430 | |
| 79 | E | A | -3.4212 | |
| 80 | R | A | 0.0000 | |
| 81 | H | A | 0.0000 | |
| 82 | V | A | 0.0000 | |
| 83 | G | A | 0.0000 | |
| 84 | D | A | 0.0000 | |
| 85 | L | A | 0.0000 | |
| 86 | G | A | 0.0000 | |
| 87 | N | A | -0.1350 | |
| 88 | V | A | 0.0000 | |
| 89 | T | A | -0.8628 | |
| 90 | A | A | 0.0000 | |
| 91 | D | A | -3.3556 | |
| 92 | K | A | -3.6826 | |
| 93 | D | A | -3.5304 | |
| 94 | G | A | 0.0000 | |
| 95 | V | A | -2.6345 | |
| 96 | A | A | 0.0000 | |
| 97 | D | A | -2.1281 | |
| 98 | V | A | 0.0000 | |
| 99 | S | A | -0.9787 | |
| 100 | I | A | -1.1049 | |
| 101 | E | A | -2.1359 | |
| 102 | D | A | 0.0000 | |
| 103 | S | A | -1.0341 | |
| 104 | V | A | -0.4578 | |
| 105 | I | A | 0.0000 | |
| 106 | S | A | -1.0002 | |
| 107 | L | A | 0.0000 | |
| 108 | S | A | -0.5977 | |
| 109 | G | A | -1.4561 | |
| 110 | D | A | -2.0716 | |
| 111 | H | A | -1.0419 | |
| 112 | S | A | -0.7939 | mutated: CS112A |
| 113 | I | A | 0.0000 | |
| 114 | I | A | 0.6208 | |
| 115 | G | A | 0.2661 | |
| 116 | R | A | 0.0474 | |
| 117 | T | A | 0.0000 | |
| 118 | L | A | 0.0000 | |
| 119 | V | A | 0.0000 | |
| 120 | V | A | 0.0000 | |
| 121 | H | A | 0.0000 | |
| 122 | E | A | -1.9575 | |
| 123 | K | A | -1.9186 | |
| 124 | A | A | -0.7249 | |
| 125 | D | A | 0.0000 | |
| 126 | D | A | -1.1702 | |
| 127 | L | A | -1.0322 | |
| 128 | G | A | -2.4689 | |
| 129 | K | A | -2.2437 | |
| 130 | G | A | -2.2125 | |
| 131 | G | A | -2.1383 | |
| 132 | N | A | -2.8330 | |
| 133 | E | A | -3.4582 | |
| 134 | E | A | -3.0778 | |
| 135 | S | A | 0.0000 | |
| 136 | T | A | -3.1320 | |
| 137 | K | A | -3.2063 | |
| 138 | T | A | -1.8169 | |
| 139 | G | A | 0.0000 | |
| 140 | N | A | -2.0638 | |
| 141 | A | A | 0.0000 | |
| 142 | G | A | -1.4085 | |
| 143 | S | A | -1.2393 | |
| 144 | R | A | -1.2747 | |
| 145 | L | A | -1.4889 | |
| 146 | A | A | 0.0000 | |
| 147 | C | A | 0.0000 | |
| 148 | G | A | 0.0000 | |
| 149 | V | A | 1.2050 | |
| 150 | I | A | 0.0000 | |
| 151 | G | A | 1.2203 | |
| 152 | I | A | 1.8899 | |
| 153 | A | A | 0.2424 | |
| 154 | Q | A | -0.8441 |