| Chain sequence(s) |
A: GKITLYEDRGFQGRHYECSSDHPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRRGDYADHQQWMGLSDSVRSCRLIPHSGSHRIRLYEREDYRGQMIEFTEDCSCLEDRFRFNEIHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVIDFS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:43)
[INFO] Main: Simulation completed successfully. (00:01:43)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.4570 | |
| 2 | K | A | -2.2857 | |
| 3 | I | A | 0.0000 | |
| 4 | T | A | 0.0000 | |
| 5 | L | A | 0.0000 | |
| 6 | Y | A | -1.8838 | |
| 7 | E | A | 0.0000 | |
| 8 | D | A | -2.7691 | |
| 9 | R | A | -2.5162 | |
| 10 | G | A | -1.6613 | |
| 11 | F | A | -1.8409 | |
| 12 | Q | A | -2.5287 | |
| 13 | G | A | -2.4547 | |
| 14 | R | A | -2.3537 | |
| 15 | H | A | -2.2323 | |
| 16 | Y | A | -1.2512 | |
| 17 | E | A | -2.2186 | |
| 18 | C | A | 0.0000 | |
| 19 | S | A | -1.4414 | |
| 20 | S | A | -1.2956 | |
| 21 | D | A | -1.6358 | |
| 22 | H | A | -1.5821 | |
| 23 | P | A | -1.5966 | |
| 24 | N | A | -1.5738 | |
| 25 | L | A | 0.0000 | |
| 26 | Q | A | -1.2123 | |
| 27 | P | A | -0.5239 | |
| 28 | Y | A | -0.6261 | |
| 29 | L | A | 0.0000 | |
| 30 | S | A | -1.2764 | |
| 31 | R | A | -1.8110 | |
| 32 | C | A | 0.0000 | |
| 33 | N | A | 0.0000 | |
| 34 | S | A | 0.0000 | |
| 35 | A | A | 0.0000 | |
| 36 | R | A | -2.7816 | |
| 37 | V | A | 0.0000 | |
| 38 | D | A | -3.2185 | |
| 39 | S | A | -2.3313 | |
| 40 | G | A | -1.7178 | |
| 41 | C | A | 0.0000 | |
| 42 | W | A | 0.0000 | |
| 43 | M | A | 0.0000 | |
| 44 | L | A | 0.0000 | |
| 45 | Y | A | 0.0000 | |
| 46 | E | A | -1.6120 | |
| 47 | Q | A | -1.8443 | |
| 48 | P | A | -1.7589 | |
| 49 | N | A | -2.0500 | |
| 50 | Y | A | -1.3520 | |
| 51 | S | A | -1.0937 | |
| 52 | G | A | -1.0663 | |
| 53 | L | A | -0.4615 | |
| 54 | Q | A | -0.4143 | |
| 55 | Y | A | 0.0000 | |
| 56 | F | A | 0.0000 | |
| 57 | L | A | 0.0000 | |
| 58 | R | A | -2.0123 | |
| 59 | R | A | -3.3671 | |
| 60 | G | A | -2.7942 | |
| 61 | D | A | -2.8753 | |
| 62 | Y | A | -1.9693 | |
| 63 | A | A | -1.6557 | |
| 64 | D | A | -1.8903 | |
| 65 | H | A | -1.6054 | |
| 66 | Q | A | -1.8392 | |
| 67 | Q | A | -1.9789 | |
| 68 | W | A | 0.0000 | |
| 69 | M | A | -0.9703 | |
| 70 | G | A | -0.5816 | |
| 71 | L | A | 0.5612 | |
| 72 | S | A | -0.7011 | |
| 73 | D | A | -1.9555 | |
| 74 | S | A | -1.6021 | |
| 75 | V | A | 0.0000 | |
| 76 | R | A | -1.6943 | |
| 77 | S | A | 0.0000 | |
| 78 | C | A | 0.0000 | |
| 79 | R | A | -0.9991 | |
| 80 | L | A | -0.4453 | |
| 81 | I | A | 0.0000 | |
| 82 | P | A | -0.5628 | |
| 83 | H | A | -1.4623 | |
| 84 | S | A | -1.3326 | |
| 85 | G | A | -1.1826 | |
| 86 | S | A | -1.4403 | |
| 87 | H | A | 0.0000 | |
| 88 | R | A | -1.8764 | |
| 89 | I | A | 0.0000 | |
| 90 | R | A | -0.7536 | |
| 91 | L | A | 0.0000 | |
| 92 | Y | A | 0.0000 | |
| 93 | E | A | -2.2152 | |
| 94 | R | A | -2.7313 | |
| 95 | E | A | -3.1340 | |
| 96 | D | A | -3.3887 | |
| 97 | Y | A | -2.4872 | |
| 98 | R | A | -3.1906 | |
| 99 | G | A | -2.2716 | |
| 100 | Q | A | -1.6173 | |
| 101 | M | A | -0.6097 | |
| 102 | I | A | -0.4967 | |
| 103 | E | A | -0.8643 | |
| 104 | F | A | 0.0000 | |
| 105 | T | A | -1.7422 | |
| 106 | E | A | -2.0813 | |
| 107 | D | A | -1.1774 | |
| 108 | C | A | 0.0000 | |
| 109 | S | A | -1.4033 | |
| 110 | C | A | -1.6592 | |
| 111 | L | A | 0.0000 | |
| 112 | E | A | -3.7481 | |
| 113 | D | A | -3.8235 | |
| 114 | R | A | -3.5492 | |
| 115 | F | A | 0.0000 | |
| 116 | R | A | -3.1952 | |
| 117 | F | A | -2.1771 | |
| 118 | N | A | -2.1804 | |
| 119 | E | A | -2.5130 | |
| 120 | I | A | 0.0000 | |
| 121 | H | A | -2.3781 | |
| 122 | S | A | 0.0000 | |
| 123 | L | A | 0.0000 | |
| 124 | N | A | -1.4178 | |
| 125 | V | A | 0.0000 | |
| 126 | L | A | -0.7706 | |
| 127 | E | A | -1.8439 | |
| 128 | G | A | 0.0000 | |
| 129 | S | A | 0.0000 | |
| 130 | W | A | 0.0000 | |
| 131 | V | A | 0.0000 | |
| 132 | L | A | 0.0000 | |
| 133 | Y | A | 0.0000 | |
| 134 | E | A | -1.1133 | |
| 135 | L | A | -0.4629 | |
| 136 | S | A | -0.9562 | |
| 137 | N | A | -1.0924 | |
| 138 | Y | A | -1.0249 | |
| 139 | R | A | -1.7333 | |
| 140 | G | A | -0.6040 | |
| 141 | R | A | -0.6372 | |
| 142 | Q | A | 0.0000 | |
| 143 | Y | A | 0.0000 | |
| 144 | L | A | 0.1870 | |
| 145 | L | A | 0.0000 | |
| 146 | M | A | -0.2069 | |
| 147 | P | A | -0.9618 | |
| 148 | G | A | -1.2342 | |
| 149 | D | A | -2.3819 | |
| 150 | Y | A | -2.4385 | |
| 151 | R | A | -3.1094 | |
| 152 | R | A | -3.2563 | |
| 153 | Y | A | -2.2038 | |
| 154 | Q | A | -2.2331 | |
| 155 | D | A | -2.7160 | |
| 156 | W | A | 0.0000 | |
| 157 | G | A | -1.4817 | |
| 158 | A | A | 0.0000 | |
| 159 | T | A | -0.9514 | |
| 160 | N | A | -1.5312 | |
| 161 | A | A | -1.8464 | |
| 162 | R | A | -2.1105 | |
| 163 | V | A | 0.0000 | |
| 164 | G | A | 0.0000 | |
| 165 | S | A | 0.0000 | |
| 166 | L | A | 0.0000 | |
| 167 | R | A | -0.7289 | |
| 168 | R | A | -1.0747 | |
| 169 | V | A | 0.0000 | |
| 170 | I | A | -1.1464 | |
| 171 | D | A | -1.5809 | |
| 172 | F | A | 0.5384 | |
| 173 | S | A | 0.0189 |