Chain sequence(s) |
H: QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYNMHWVRQAPGQGLEWMGVIYSGNGDTSYAQKFKGRVTITADKSTSTAYMELSSLRSEDTAVYYCARERDTRFGNWGQGTLVTVSS
L: DIVMTQSPLSLPVTPGEPASISCRASESVDIYGQSFMHWYLQKPGQSPQLLIYLASNLESGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCQQNNEDPYTFGGGTKVEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:50) [INFO] Main: Simulation completed successfully. (00:02:53) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.4659 | |
2 | V | H | -1.0499 | |
3 | Q | H | -1.5679 | |
4 | L | H | 0.0000 | |
5 | V | H | -0.2174 | |
6 | Q | H | 0.0000 | |
7 | S | H | -0.5697 | |
8 | G | H | -0.5117 | |
9 | A | H | 0.2590 | |
11 | E | H | 0.0295 | |
12 | V | H | 0.9585 | |
13 | K | H | -0.9694 | |
14 | K | H | -2.1425 | |
15 | P | H | -1.8728 | |
16 | G | H | -1.6253 | |
17 | A | H | -1.2396 | |
18 | S | H | -1.3720 | |
19 | V | H | 0.0000 | |
20 | K | H | -1.9277 | |
21 | V | H | 0.0000 | |
22 | S | H | -0.6175 | |
23 | C | H | 0.0000 | |
24 | K | H | -0.9675 | |
25 | A | H | 0.0000 | |
26 | S | H | -0.9118 | |
27 | G | H | -0.9944 | |
28 | Y | H | -0.3816 | |
29 | T | H | -0.2148 | |
30 | F | H | 0.0000 | |
35 | T | H | -0.6175 | |
36 | S | H | -0.4416 | |
37 | Y | H | -0.5213 | |
38 | N | H | -0.7390 | |
39 | M | H | 0.0000 | |
40 | H | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.4738 | |
45 | A | H | -0.8891 | |
46 | P | H | -0.7408 | |
47 | G | H | -1.2136 | |
48 | Q | H | -1.7240 | |
49 | G | H | -1.0227 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.5337 | |
52 | W | H | 0.0000 | |
53 | M | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | V | H | 0.0021 | |
56 | I | H | 0.0000 | |
57 | Y | H | -0.5001 | |
58 | S | H | 0.0000 | |
59 | G | H | -1.2000 | |
62 | N | H | -1.8560 | |
63 | G | H | -1.7749 | |
64 | D | H | -2.1107 | |
65 | T | H | -0.9041 | |
66 | S | H | -0.7721 | |
67 | Y | H | -1.0983 | |
68 | A | H | 0.0000 | |
69 | Q | H | -2.9077 | |
70 | K | H | -2.7422 | |
71 | F | H | 0.0000 | |
72 | K | H | -2.5362 | |
74 | G | H | -1.7444 | |
75 | R | H | -1.5326 | |
76 | V | H | 0.0000 | |
77 | T | H | -0.8847 | |
78 | I | H | 0.0000 | |
79 | T | H | -0.4940 | |
80 | A | H | -0.7816 | |
81 | D | H | -1.1881 | |
82 | K | H | -1.4133 | |
83 | S | H | -0.8775 | |
84 | T | H | -0.7896 | |
85 | S | H | -0.9311 | |
86 | T | H | 0.0000 | |
87 | A | H | 0.0000 | |
88 | Y | H | -0.6000 | |
89 | M | H | 0.0000 | |
90 | E | H | -1.5859 | |
91 | L | H | 0.0000 | |
92 | S | H | -1.2083 | |
93 | S | H | -1.2878 | |
94 | L | H | 0.0000 | |
95 | R | H | -3.1222 | |
96 | S | H | -2.3748 | |
97 | E | H | -2.5645 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.7351 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.5663 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | -0.8880 | |
107 | E | H | -1.4467 | |
108 | R | H | -2.4383 | |
109 | D | H | -2.0602 | |
113 | T | H | 0.0000 | |
114 | R | H | -1.3158 | |
115 | F | H | 0.0000 | |
116 | G | H | -1.1208 | |
117 | N | H | -0.9926 | |
118 | W | H | -0.7389 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.3178 | |
121 | G | H | -0.3882 | |
122 | T | H | 0.0000 | |
123 | L | H | 0.9615 | |
124 | V | H | 0.0000 | |
125 | T | H | -0.1336 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.9842 | |
128 | S | H | -0.8444 | |
1 | D | L | -2.1099 | |
2 | I | L | 0.0000 | |
3 | V | L | 0.7928 | |
4 | M | L | 0.0000 | |
5 | T | L | -0.4076 | |
6 | Q | L | 0.0000 | |
7 | S | L | -0.2197 | |
8 | P | L | 0.2853 | |
9 | L | L | 1.1053 | |
10 | S | L | 0.2079 | |
11 | L | L | 0.0520 | |
12 | P | L | -0.4907 | |
13 | V | L | 0.0000 | |
14 | T | L | -1.4063 | |
15 | P | L | -1.7456 | |
16 | G | L | -2.3097 | |
17 | E | L | -2.4387 | |
18 | P | L | -2.0123 | |
19 | A | L | 0.0000 | |
20 | S | L | -0.7588 | |
21 | I | L | 0.0000 | |
22 | S | L | -0.8473 | |
23 | C | L | 0.0000 | |
24 | R | L | -2.2885 | |
25 | A | L | 0.0000 | |
26 | S | L | -0.8791 | |
27 | E | L | -1.4060 | |
28 | S | L | -1.2242 | |
29 | V | L | 0.0000 | |
30 | D | L | -0.5244 | |
31 | I | L | 0.7939 | |
34 | Y | L | 1.1543 | |
35 | G | L | -0.1198 | |
36 | Q | L | -0.6001 | |
37 | S | L | -0.4778 | |
38 | F | L | -0.2881 | |
39 | M | L | 0.0000 | |
40 | H | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | L | L | 0.0000 | |
44 | Q | L | -0.8172 | |
45 | K | L | -1.2046 | |
46 | P | L | -0.8167 | |
47 | G | L | -1.3180 | |
48 | Q | L | -1.8318 | |
49 | S | L | -1.2802 | |
50 | P | L | 0.0000 | |
51 | Q | L | -1.1857 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | -0.1771 | |
56 | L | L | -0.4604 | |
57 | A | L | 0.0000 | |
65 | S | L | -0.5970 | |
66 | N | L | -0.4954 | |
67 | L | L | -0.1755 | |
68 | E | L | -0.4139 | |
69 | S | L | -0.4844 | |
70 | G | L | -0.7474 | |
71 | V | L | 0.0000 | |
72 | P | L | -1.1063 | |
74 | D | L | -2.1406 | |
75 | R | L | -2.0147 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.9612 | |
78 | G | L | -0.5549 | |
79 | S | L | -0.8186 | |
80 | G | L | -1.1258 | |
83 | S | L | -1.3090 | |
84 | G | L | -1.2176 | |
85 | T | L | -1.7306 | |
86 | D | L | -2.0669 | |
87 | F | L | 0.0000 | |
88 | T | L | -1.0122 | |
89 | L | L | 0.0000 | |
90 | K | L | -1.3750 | |
91 | I | L | 0.0000 | |
92 | S | L | -2.2330 | |
93 | R | L | -3.3486 | |
94 | V | L | 0.0000 | |
95 | E | L | -2.6454 | |
96 | A | L | -1.2632 | |
97 | E | L | -2.0797 | |
98 | D | L | 0.0000 | |
99 | V | L | -0.3207 | |
100 | G | L | 0.0000 | |
101 | V | L | 0.0114 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | N | L | -0.8312 | |
108 | N | L | -1.1273 | |
109 | E | L | -2.3163 | |
114 | D | L | -2.4718 | |
115 | P | L | -2.0645 | |
116 | Y | L | -0.7461 | |
117 | T | L | -0.3028 | |
118 | F | L | 0.2770 | |
119 | G | L | 0.0000 | |
120 | G | L | -0.3415 | |
121 | G | L | 0.0000 | |
122 | T | L | 0.0000 | |
123 | K | L | -0.5697 | |
124 | V | L | 0.0000 | |
125 | E | L | -0.2046 | |
126 | I | L | 0.0789 | |
127 | K | L | -1.3368 |