Project name: d89977993a86569

Status: done

Started: 2025-06-03 05:13:25
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Chain sequence(s) H: QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYWMNWVRQAPGQGLEWMGDIYPGSGNTNYDEKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGGYYEDFDSWGQGTTVTVSS
L: DIQMTQSPSFLSASVGDRVTITCRASQGIISYLAWYQQKPEKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCGQYANYPYTFGQGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:04)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:06)
Show buried residues

Minimal score value
-3.4169
Maximal score value
1.8336
Average score
-0.5113
Total score value
-115.0518

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.4143
2 V H -0.9085
3 Q H -1.2095
4 L H 0.0000
5 V H 0.2616
6 Q H 0.0000
7 S H -0.6392
8 G H -0.6064
9 A H -0.0518
11 E H -0.1625
12 V H 0.8975
13 K H -0.8958
14 K H -2.3254
15 P H -2.5667
16 G H -2.2449
17 A H -1.7481
18 S H -1.8295
19 V H 0.0000
20 K H -2.0650
21 V H 0.0000
22 S H -0.7295
23 C H 0.0000
24 K H -0.8215
25 A H 0.0000
26 S H -0.6055
27 G H -0.9313
28 Y H -0.3212
29 T H -0.0626
30 F H 0.0000
35 T H -0.0482
36 G H 0.2360
37 Y H 0.7471
38 W H 0.6136
39 M H 0.0000
40 N H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.5802
45 A H -1.0144
46 P H -1.0321
47 G H -1.2108
48 Q H -1.8257
49 G H -1.2648
50 L H 0.0000
51 E H -0.8155
52 W H 0.0000
53 M H 0.0000
54 G H 0.0000
55 D H 0.0000
56 I H 0.0000
57 Y H -0.2281
58 P H 0.0000
59 G H -0.5556
62 S H -0.7377
63 G H -0.9981
64 N H -1.4005
65 T H -0.7153
66 N H -0.8159
67 Y H -1.1364
68 D H -2.0838
69 E H -3.4169
70 K H -3.0921
71 F H 0.0000
72 Q H -2.7553
74 G H -1.8792
75 R H -1.9111
76 V H 0.0000
77 T H -0.8206
78 M H 0.0000
79 T H -0.8412
80 R H -0.8686
81 D H -0.6962
82 T H -0.2835
83 S H 0.3055
84 I H 1.0670
85 S H 0.0215
86 T H 0.0000
87 A H 0.0000
88 Y H -0.8930
89 M H 0.0000
90 E H -1.4510
91 L H 0.0000
92 S H -1.8845
93 R H -2.8298
94 L H 0.0000
95 R H -3.4065
96 S H -2.3748
97 D H -2.5561
98 D H 0.0000
99 T H -0.9010
100 A H 0.0000
101 V H -0.0178
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H -0.1259
107 G H 0.0000
108 G H 0.0000
109 Y H 1.8336
110 Y H 1.7038
113 E H 0.7067
114 D H 0.1526
115 F H 0.0000
116 D H -0.7229
117 S H -0.6923
118 W H -0.6506
119 G H 0.0000
120 Q H -1.5945
121 G H -0.8994
122 T H 0.0000
123 T H -0.0008
124 V H 0.0000
125 T H -0.3199
126 V H 0.0000
127 S H -1.1530
128 S H -0.7862
1 D L -2.5396
2 I L 0.0000
3 Q L -2.2714
4 M L 0.0000
5 T L -1.4184
6 Q L 0.0000
7 S L -0.3147
8 P L 0.3077
9 S L 0.3890
10 F L 1.5364
11 L L 0.8702
12 S L 0.1313
13 A L 0.0000
14 S L 0.0280
15 V L 0.7472
16 G L -0.4111
17 D L -1.3918
18 R L -2.0619
19 V L 0.0000
20 T L -0.5501
21 I L 0.0000
22 T L -0.7919
23 C L 0.0000
24 R L -2.7585
25 A L 0.0000
26 S L -1.9490
27 Q L -1.7326
28 G L -0.5896
29 I L 0.0000
36 I L 1.7419
37 S L 0.8979
38 Y L 1.1276
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.8461
44 Q L 0.0000
45 K L -1.9903
46 P L -1.8883
47 E L -2.9656
48 K L -3.2026
49 A L -1.8743
50 P L 0.0000
51 K L -1.4823
52 R L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.3048
56 A L 0.4521
57 A L 0.0000
65 S L -0.1666
66 S L 0.0785
67 L L 0.2172
68 Q L -0.3673
69 S L -0.4912
70 G L -0.5983
71 V L 0.0000
72 P L -0.4068
74 S L -0.4416
75 R L -0.7012
76 F L 0.0000
77 S L -0.3171
78 G L -0.2434
79 S L -0.6586
80 G L -0.7019
83 S L -0.2656
84 G L -0.3028
85 T L -1.3671
86 E L -1.8789
87 F L 0.0000
88 T L -0.7370
89 L L 0.0000
90 T L -0.5897
91 I L 0.0000
92 S L -1.2112
93 S L -0.9768
94 L L 0.0000
95 Q L -0.7382
96 P L -0.6696
97 E L -1.8791
98 D L 0.0000
99 F L -0.2219
100 A L 0.0000
101 T L -0.4326
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 G L 0.0000
106 Q L 0.0000
107 Y L 0.0000
108 A L 0.1188
109 N L -1.0147
114 Y L -0.6455
115 P L -1.0659
116 Y L 0.0000
117 T L -0.7900
118 F L -0.3606
119 G L 0.0000
120 Q L -1.5090
121 G L 0.0000
122 T L 0.0000
123 K L -0.3128
124 L L 0.0000
125 E L 0.4086
126 I L 1.2191
127 K L -0.6545
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Laboratory of Theory of Biopolymers 2018