| Chain sequence(s) |
A: GGGGSGGGGSGGGGSGGGGSEVQLVESGGGLVQPGGSLRLSCAASLEHVAIGWFRQAPGKEREGVSCISSSGGHIHYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAAVSYWECYDKLDYWGQGTLVTVSSPP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:52)
[INFO] Main: Simulation completed successfully. (00:01:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.5519 | |
| 2 | G | A | -0.6371 | |
| 3 | G | A | -0.6377 | |
| 4 | G | A | -0.5915 | |
| 5 | S | A | -0.3832 | |
| 6 | G | A | -0.5899 | |
| 7 | G | A | -0.6358 | |
| 8 | G | A | -0.6361 | |
| 9 | G | A | -0.5901 | |
| 10 | S | A | -0.3826 | |
| 11 | G | A | -0.5906 | |
| 12 | G | A | -0.6374 | |
| 13 | G | A | -0.6372 | |
| 14 | G | A | -0.5913 | |
| 15 | S | A | -0.3858 | |
| 16 | G | A | -0.5902 | |
| 17 | G | A | -0.6357 | |
| 18 | G | A | -0.6371 | |
| 19 | G | A | -0.5911 | |
| 20 | S | A | -0.6287 | |
| 21 | E | A | -1.7938 | |
| 22 | V | A | -0.1379 | |
| 23 | Q | A | -0.8436 | |
| 24 | L | A | 0.0000 | |
| 25 | V | A | 1.7377 | |
| 26 | E | A | 0.1073 | |
| 27 | S | A | -0.2435 | |
| 28 | G | A | -0.3735 | |
| 29 | G | A | -0.2780 | |
| 30 | G | A | 0.0587 | |
| 31 | L | A | 1.5105 | |
| 32 | V | A | 0.0000 | |
| 33 | Q | A | -1.2406 | |
| 34 | P | A | -0.5346 | |
| 35 | G | A | -0.5397 | |
| 36 | G | A | -0.1721 | |
| 37 | S | A | -0.1818 | |
| 38 | L | A | -0.1257 | |
| 39 | R | A | -1.8479 | |
| 40 | L | A | 0.0000 | |
| 41 | S | A | -0.0135 | |
| 42 | C | A | 0.0000 | |
| 43 | A | A | 0.0290 | |
| 44 | A | A | -0.0202 | |
| 45 | S | A | -0.0949 | |
| 46 | L | A | 0.0866 | |
| 47 | E | A | -1.8978 | |
| 48 | H | A | -1.2188 | |
| 49 | V | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | G | A | 0.0000 | |
| 53 | W | A | 0.0000 | |
| 54 | F | A | 0.2172 | |
| 55 | R | A | 0.0000 | |
| 56 | Q | A | -0.7728 | |
| 57 | A | A | -0.1471 | |
| 58 | P | A | -0.3377 | |
| 59 | G | A | -0.8147 | |
| 60 | K | A | -2.1208 | |
| 61 | E | A | -2.4040 | |
| 62 | R | A | -2.0057 | |
| 63 | E | A | -1.0246 | |
| 64 | G | A | -0.2015 | |
| 65 | V | A | 0.0000 | |
| 66 | S | A | 0.0000 | |
| 67 | C | A | 0.0000 | |
| 68 | I | A | 0.0000 | |
| 69 | S | A | 0.0000 | |
| 70 | S | A | 0.0000 | |
| 71 | S | A | -0.2437 | |
| 72 | G | A | -0.2931 | |
| 73 | G | A | -0.6754 | |
| 74 | H | A | -0.9144 | |
| 75 | I | A | 0.5056 | |
| 76 | H | A | -0.7661 | |
| 77 | Y | A | 0.1667 | |
| 78 | A | A | -0.2513 | |
| 79 | D | A | -1.8137 | |
| 80 | S | A | -0.4664 | |
| 81 | V | A | 0.0000 | |
| 82 | K | A | -1.7846 | |
| 83 | G | A | -0.8304 | |
| 84 | R | A | -0.3965 | |
| 85 | F | A | 0.0000 | |
| 86 | T | A | -0.0458 | |
| 87 | I | A | 0.0000 | |
| 88 | S | A | -0.1614 | |
| 89 | R | A | -0.3669 | |
| 90 | D | A | -0.7477 | |
| 91 | N | A | -1.1963 | |
| 92 | S | A | -0.7007 | |
| 93 | K | A | -1.7995 | |
| 94 | N | A | -0.7730 | |
| 95 | T | A | 0.0000 | |
| 96 | V | A | 0.0000 | |
| 97 | Y | A | 0.1444 | |
| 98 | L | A | 0.0000 | |
| 99 | Q | A | -0.6084 | |
| 100 | M | A | 0.0000 | |
| 101 | N | A | -0.5624 | |
| 102 | S | A | -0.2959 | |
| 103 | L | A | 0.0000 | |
| 104 | R | A | -1.8334 | |
| 105 | A | A | -0.6032 | |
| 106 | E | A | -1.8095 | |
| 107 | D | A | 0.0000 | |
| 108 | T | A | -0.0176 | |
| 109 | A | A | 0.0000 | |
| 110 | V | A | 0.7301 | |
| 111 | Y | A | 0.0000 | |
| 112 | Y | A | 0.2105 | |
| 113 | C | A | 0.0000 | |
| 114 | A | A | 0.0000 | |
| 115 | A | A | 0.0000 | |
| 116 | A | A | 0.0000 | |
| 117 | V | A | 1.7625 | |
| 118 | S | A | 0.3973 | |
| 119 | Y | A | 0.9582 | |
| 120 | W | A | 1.1398 | |
| 121 | E | A | -0.7940 | |
| 122 | C | A | 0.0000 | |
| 123 | Y | A | 0.3007 | |
| 124 | D | A | -1.9884 | |
| 125 | K | A | -1.9945 | |
| 126 | L | A | -0.4541 | |
| 127 | D | A | -1.6764 | |
| 128 | Y | A | 0.1960 | |
| 129 | W | A | 0.4746 | |
| 130 | G | A | -0.1973 | |
| 131 | Q | A | -1.2247 | |
| 132 | G | A | -0.2753 | |
| 133 | T | A | 0.2575 | |
| 134 | L | A | 1.6181 | |
| 135 | V | A | 0.0000 | |
| 136 | T | A | 0.1622 | |
| 137 | V | A | 0.0000 | |
| 138 | S | A | -0.1518 | |
| 139 | S | A | -0.2800 | |
| 140 | P | A | -0.3397 | |
| 141 | P | A | -0.3011 |