| Chain sequence(s) |
A: FKFKGHFKF
C: FKFKGHFKF B: FKFKGHFKF E: FKFKGHFKF D: FKFKGHFKF G: FKFKGHFKF F: FKFKGHFKF H: FKFKGHFKF input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:50)
[INFO] Main: Simulation completed successfully. (00:08:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 0.1659 | |
| 2 | K | A | -2.3301 | |
| 3 | F | A | 0.0000 | |
| 4 | K | A | -2.6853 | |
| 5 | G | A | 0.0000 | |
| 6 | H | A | -1.8718 | |
| 7 | F | A | 0.0000 | |
| 8 | K | A | -1.1298 | |
| 9 | F | A | 1.1295 | |
| 1 | F | B | 0.9555 | |
| 2 | K | B | -1.6963 | |
| 3 | F | B | -1.4274 | |
| 4 | K | B | -2.8110 | |
| 5 | G | B | 0.0000 | |
| 6 | H | B | -2.1747 | |
| 7 | F | B | 0.0000 | |
| 8 | K | B | -1.2308 | |
| 9 | F | B | 1.2875 | |
| 1 | F | C | 1.2466 | |
| 2 | K | C | -1.1600 | |
| 3 | F | C | -0.9022 | |
| 4 | K | C | -2.4672 | |
| 5 | G | C | -1.3086 | |
| 6 | H | C | -1.9415 | |
| 7 | F | C | -0.5992 | |
| 8 | K | C | -0.9119 | |
| 9 | F | C | 1.4708 | |
| 1 | F | D | 0.4764 | |
| 2 | K | D | -1.6224 | |
| 3 | F | D | 0.0000 | |
| 4 | K | D | -2.4340 | |
| 5 | G | D | 0.0000 | |
| 6 | H | D | -1.6479 | |
| 7 | F | D | 0.0000 | |
| 8 | K | D | -0.7041 | |
| 9 | F | D | 1.3296 | |
| 1 | F | E | 0.4196 | |
| 2 | K | E | -1.6032 | |
| 3 | F | E | 0.0000 | |
| 4 | K | E | -2.3100 | |
| 5 | G | E | 0.0000 | |
| 6 | H | E | -1.5734 | |
| 7 | F | E | 0.0000 | |
| 8 | K | E | -0.3956 | |
| 9 | F | E | 1.4848 | |
| 1 | F | F | 1.1617 | |
| 2 | K | F | -1.3804 | |
| 3 | F | F | -1.2213 | |
| 4 | K | F | -2.6837 | |
| 5 | G | F | -1.5195 | |
| 6 | H | F | -1.7611 | |
| 7 | F | F | -0.5140 | |
| 8 | K | F | -0.5698 | |
| 9 | F | F | 1.6332 | |
| 1 | F | G | 1.4160 | |
| 2 | K | G | -0.9758 | |
| 3 | F | G | -0.7181 | |
| 4 | K | G | -2.2509 | |
| 5 | G | G | -1.1798 | |
| 6 | H | G | -1.3678 | |
| 7 | F | G | 0.1000 | |
| 8 | K | G | -0.5242 | |
| 9 | F | G | 1.7143 | |
| 1 | F | H | 0.5317 | |
| 2 | K | H | -1.4879 | |
| 3 | F | H | 0.0000 | |
| 4 | K | H | -2.3863 | |
| 5 | G | H | 0.0000 | |
| 6 | H | H | -1.5204 | |
| 7 | F | H | 0.0000 | |
| 8 | K | H | -0.3083 | |
| 9 | F | H | 1.5834 |