| Chain sequence(s) |
A: LAERLKAKLPEATPTELAKLVNKRSDFASNCCSI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:54)
[INFO] Main: Simulation completed successfully. (00:00:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | -0.6213 | |
| 2 | A | A | -1.4515 | |
| 3 | E | A | -2.7457 | |
| 4 | R | A | -2.8605 | |
| 5 | L | A | -1.6818 | |
| 6 | K | A | -2.4278 | |
| 7 | A | A | -2.3090 | |
| 8 | K | A | -2.6802 | |
| 9 | L | A | -1.8988 | |
| 10 | P | A | -1.6106 | |
| 11 | E | A | -2.2855 | |
| 12 | A | A | -1.4268 | |
| 13 | T | A | -0.9960 | |
| 14 | P | A | -1.0533 | |
| 15 | T | A | -0.9483 | |
| 16 | E | A | -1.5813 | |
| 17 | L | A | -1.4270 | |
| 18 | A | A | -1.6192 | |
| 19 | K | A | -2.8233 | |
| 20 | L | A | -1.9014 | |
| 21 | V | A | -2.1208 | |
| 22 | N | A | -3.0697 | |
| 23 | K | A | -3.5366 | |
| 24 | R | A | -2.9281 | |
| 25 | S | A | -2.2117 | |
| 26 | D | A | -2.6255 | |
| 27 | F | A | -0.5835 | |
| 28 | A | A | -0.6449 | |
| 29 | S | A | -0.6063 | |
| 30 | N | A | -0.7707 | |
| 31 | C | A | 0.8580 | |
| 32 | C | A | 1.2267 | |
| 33 | S | A | 1.1212 | |
| 34 | I | A | 2.1881 |