| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGRTFPTYGMGWFRQAPGKEREFVSAINWSGAMTRYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAAVTAVIASNYDYWGQGTTVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:30)
[INFO] Main: Simulation completed successfully. (00:00:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.7009 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.7574 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.0853 | |
| 6 | E | H | 0.2447 | |
| 7 | S | H | -0.3734 | |
| 8 | G | H | -0.8645 | |
| 9 | G | H | -0.2820 | |
| 11 | G | H | 0.4049 | |
| 12 | L | H | 1.2656 | |
| 13 | V | H | 0.0323 | |
| 14 | Q | H | -1.3020 | |
| 15 | P | H | -1.5112 | |
| 16 | G | H | -1.3754 | |
| 17 | G | H | -0.9405 | |
| 18 | S | H | -0.9943 | |
| 19 | L | H | -0.4550 | |
| 20 | R | H | -1.2043 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.1958 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.1565 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.4014 | |
| 27 | G | H | -1.9230 | |
| 28 | R | H | -1.9795 | |
| 29 | T | H | -0.8405 | |
| 30 | F | H | 0.0000 | |
| 35 | P | H | -0.7268 | |
| 36 | T | H | 0.0899 | |
| 37 | Y | H | 0.5721 | |
| 38 | G | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | F | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -1.5275 | |
| 45 | A | H | -1.5915 | |
| 46 | P | H | -1.3324 | |
| 47 | G | H | -1.8952 | |
| 48 | K | H | -3.1586 | |
| 49 | E | H | -3.2278 | |
| 50 | R | H | -2.1591 | |
| 51 | E | H | -1.2679 | |
| 52 | F | H | -0.0605 | |
| 53 | V | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | A | H | -0.2115 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | 0.1144 | |
| 58 | W | H | 0.2230 | |
| 59 | S | H | -0.1868 | |
| 62 | G | H | -0.2678 | |
| 63 | A | H | -0.1166 | |
| 64 | M | H | -0.1489 | |
| 65 | T | H | -0.7411 | |
| 66 | R | H | -1.7730 | |
| 67 | Y | H | -1.4878 | |
| 68 | A | H | -1.4140 | |
| 69 | D | H | -2.5961 | |
| 70 | S | H | -1.7207 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.5756 | |
| 74 | G | H | -1.5950 | |
| 75 | R | H | -1.3588 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.8398 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.2813 | |
| 80 | R | H | -0.8764 | |
| 81 | D | H | -1.5075 | |
| 82 | N | H | -1.6509 | |
| 83 | S | H | -1.6017 | |
| 84 | K | H | -2.4044 | |
| 85 | N | H | -1.9183 | |
| 86 | T | H | -0.9569 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.2898 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.7806 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.1936 | |
| 93 | S | H | -1.2177 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.1624 | |
| 96 | A | H | -1.6324 | |
| 97 | E | H | -2.1834 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.5918 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.0634 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0844 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | A | H | 0.0000 | |
| 107 | A | H | 0.0000 | |
| 108 | V | H | 0.8798 | |
| 109 | T | H | 1.1168 | |
| 110 | A | H | 1.6641 | |
| 111 | V | H | 2.5730 | |
| 112A | I | H | 2.4333 | |
| 112 | A | H | 0.9132 | |
| 113 | S | H | -0.6156 | |
| 114 | N | H | -1.2983 | |
| 115 | Y | H | 0.0000 | |
| 116 | D | H | -1.9569 | |
| 117 | Y | H | -1.0846 | |
| 118 | W | H | -0.3592 | |
| 119 | G | H | -0.1253 | |
| 120 | Q | H | -0.8581 | |
| 121 | G | H | -0.2549 | |
| 122 | T | H | -0.1743 | |
| 123 | T | H | 0.0109 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.0269 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6415 | |
| 128 | S | H | -0.8171 |