Chain sequence(s) |
A: MDPGLQQALNGMAPPGDTAMHVPAGSVASHLGTTSRSYFYLTTATLALCLVFTVATIMVLVVQRTDSIPNSPDNVPLKGGNCSEDLLCILKRAPFKKSWAYLQVAKHLNKTKLSWNKDGILHGVRYQDGNLVIQFPGLYFIICQLQFLVQCPNNSVDLKLELLINKHIKKQALVTVCESGMQTKHVYQNLSQFLLDYLQVNTTISVNVDTFQYIDTSTFPLENVLSIFLYSNSD
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | VT51A,FY52A |
Energy difference between WT (input) and mutated protein (by FoldX) | -0.161676 kcal/mol |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:54) [INFO] FoldX: Starting FoldX energy minimalization (00:00:56) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:29) [INFO] Main: Simulation completed successfully. (00:01:31) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | M | A | 0.1397 | |
2 | D | A | -1.5045 | |
3 | P | A | -0.7619 | |
4 | G | A | -0.4774 | |
5 | L | A | 0.4091 | |
6 | Q | A | -1.1860 | |
7 | Q | A | -1.1287 | |
8 | A | A | -0.3019 | |
9 | L | A | 0.7317 | |
10 | N | A | -0.4723 | |
11 | G | A | -0.2522 | |
12 | M | A | 0.7071 | |
13 | A | A | 0.0340 | |
14 | P | A | -0.5688 | |
15 | P | A | -1.0389 | |
16 | G | A | -1.5418 | |
17 | D | A | -2.1357 | |
18 | T | A | -0.8983 | |
19 | A | A | -0.1874 | |
20 | M | A | 0.9386 | |
21 | H | A | 0.3439 | |
22 | V | A | 1.3437 | |
23 | P | A | 0.3645 | |
24 | A | A | 0.2153 | |
25 | G | A | 0.0823 | |
26 | S | A | 0.3637 | |
27 | V | A | 1.5555 | |
28 | A | A | 0.7096 | |
29 | S | A | 0.0482 | |
30 | H | A | -0.2215 | |
31 | L | A | 0.6983 | |
32 | G | A | -0.6342 | |
33 | T | A | -0.6521 | |
34 | T | A | -0.0424 | |
35 | S | A | 0.1948 | |
36 | R | A | -0.3964 | |
37 | S | A | 0.8449 | |
38 | Y | A | 2.3597 | |
39 | F | A | 2.7407 | |
40 | Y | A | 2.6397 | |
41 | L | A | 2.9472 | |
42 | T | A | 2.2818 | |
43 | T | A | 2.1876 | |
44 | A | A | 2.1658 | |
45 | T | A | 2.0992 | |
46 | L | A | 2.8419 | |
47 | A | A | 2.2286 | |
48 | L | A | 2.6730 | |
49 | C | A | 2.8760 | |
50 | L | A | 3.3331 | |
51 | T | A | 2.7303 | mutated: VT51A |
52 | Y | A | 3.1466 | mutated: FY52A |
53 | T | A | 2.8338 | |
54 | V | A | 3.6740 | |
55 | A | A | 2.9006 | |
56 | T | A | 2.9739 | |
57 | I | A | 3.7012 | |
58 | M | A | 3.5419 | |
59 | V | A | 3.1992 | |
60 | L | A | 2.3007 | |
61 | V | A | 2.2769 | |
62 | V | A | 1.8111 | |
63 | Q | A | -0.5373 | |
64 | R | A | -1.4213 | |
65 | T | A | -0.9128 | |
66 | D | A | -2.2128 | |
67 | S | A | -1.6484 | |
68 | I | A | -1.3665 | |
69 | P | A | -1.2669 | |
70 | N | A | -1.9930 | |
71 | S | A | -1.8483 | |
72 | P | A | -1.8626 | |
73 | D | A | -2.3522 | |
74 | N | A | -1.4503 | |
75 | V | A | 0.2753 | |
76 | P | A | -0.4105 | |
77 | L | A | -0.5276 | |
78 | K | A | -1.8129 | |
79 | G | A | -1.6479 | |
80 | G | A | -2.0026 | |
81 | N | A | -2.1940 | |
82 | C | A | -1.7850 | |
83 | S | A | -1.5840 | |
84 | E | A | -2.5097 | |
85 | D | A | -1.8934 | |
86 | L | A | -0.8371 | |
87 | L | A | 0.0173 | |
88 | C | A | 0.0000 | |
89 | I | A | -0.5589 | |
90 | L | A | 0.0000 | |
91 | K | A | -1.1873 | |
92 | R | A | -1.7943 | |
93 | A | A | -0.7707 | |
94 | P | A | -0.6520 | |
95 | F | A | -0.2919 | |
96 | K | A | -1.9445 | |
97 | K | A | -1.4512 | |
98 | S | A | 0.0000 | |
99 | W | A | 0.0000 | |
100 | A | A | 0.0000 | |
101 | Y | A | 0.0000 | |
102 | L | A | 0.0000 | |
103 | Q | A | -1.0212 | |
104 | V | A | 0.0000 | |
105 | A | A | -1.4836 | |
106 | K | A | -1.6913 | |
107 | H | A | -1.3495 | |
108 | L | A | -0.0333 | |
109 | N | A | -1.6330 | |
110 | K | A | -2.4276 | |
111 | T | A | -1.7932 | |
112 | K | A | -2.3254 | |
113 | L | A | 0.0000 | |
114 | S | A | -1.5731 | |
115 | W | A | 0.0000 | |
116 | N | A | -2.4394 | |
117 | K | A | -3.0637 | |
118 | D | A | -2.8943 | |
119 | G | A | -1.6540 | |
120 | I | A | -1.2465 | |
121 | L | A | 0.0000 | |
122 | H | A | -1.3075 | |
123 | G | A | 0.0000 | |
124 | V | A | 0.0000 | |
125 | R | A | -1.2268 | |
126 | Y | A | -1.5683 | |
127 | Q | A | -2.5045 | |
128 | D | A | -2.5453 | |
129 | G | A | -1.9060 | |
130 | N | A | -1.7648 | |
131 | L | A | 0.0000 | |
132 | V | A | 0.0000 | |
133 | I | A | 0.0000 | |
134 | Q | A | -0.2289 | |
135 | F | A | 0.0766 | |
136 | P | A | -0.1723 | |
137 | G | A | 0.0000 | |
138 | L | A | 1.0448 | |
139 | Y | A | 0.0000 | |
140 | F | A | 1.5517 | |
141 | I | A | 0.0000 | |
142 | I | A | 0.0000 | |
143 | C | A | 0.0000 | |
144 | Q | A | -0.6844 | |
145 | L | A | 0.0000 | |
146 | Q | A | -0.2349 | |
147 | F | A | 0.0000 | |
148 | L | A | 0.2984 | |
149 | V | A | 0.0000 | |
150 | Q | A | -1.9263 | |
151 | C | A | 0.0000 | |
152 | P | A | -2.3066 | |
153 | N | A | -2.7968 | |
154 | N | A | -2.6091 | |
155 | S | A | -2.0769 | |
156 | V | A | 0.0000 | |
157 | D | A | -1.6298 | |
158 | L | A | 0.0000 | |
159 | K | A | -0.9624 | |
160 | L | A | 0.0000 | |
161 | E | A | -0.9099 | |
162 | L | A | 0.0000 | |
163 | L | A | 0.0000 | |
164 | I | A | 0.0000 | |
165 | N | A | -2.3668 | |
166 | K | A | -2.4983 | |
167 | H | A | -1.7045 | |
168 | I | A | -0.2125 | |
169 | K | A | -1.6384 | |
170 | K | A | -1.3017 | |
171 | Q | A | -0.9044 | |
172 | A | A | -0.1223 | |
173 | L | A | 0.6186 | |
174 | V | A | 0.3942 | |
175 | T | A | -0.5664 | |
176 | V | A | -0.3219 | |
177 | C | A | 0.0000 | |
178 | E | A | -2.8124 | |
179 | S | A | -2.3335 | |
180 | G | A | -1.9071 | |
181 | M | A | -2.0115 | |
182 | Q | A | -2.4394 | |
183 | T | A | -2.2096 | |
184 | K | A | -2.5620 | |
185 | H | A | -1.9011 | |
186 | V | A | -0.2367 | |
187 | Y | A | 0.7109 | |
188 | Q | A | 0.1167 | |
189 | N | A | -0.7822 | |
190 | L | A | 0.0000 | |
191 | S | A | -0.2987 | |
192 | Q | A | 0.0323 | |
193 | F | A | 1.2172 | |
194 | L | A | 1.0318 | |
195 | L | A | 1.9583 | |
196 | D | A | 0.8827 | |
197 | Y | A | 0.9769 | |
198 | L | A | 0.0000 | |
199 | Q | A | -0.4002 | |
200 | V | A | 0.6426 | |
201 | N | A | -0.9631 | |
202 | T | A | 0.0000 | |
203 | T | A | -1.4788 | |
204 | I | A | 0.0000 | |
205 | S | A | -0.8894 | |
206 | V | A | 0.0000 | |
207 | N | A | -0.9995 | |
208 | V | A | 0.0000 | |
209 | D | A | -2.4590 | |
210 | T | A | -1.5779 | |
211 | F | A | -1.3804 | |
212 | Q | A | -1.6804 | |
213 | Y | A | -0.3346 | |
214 | I | A | 0.0000 | |
215 | D | A | 0.0000 | |
216 | T | A | -0.4580 | |
217 | S | A | -0.1658 | |
218 | T | A | 0.0480 | |
219 | F | A | 0.2863 | |
220 | P | A | 0.0544 | |
221 | L | A | 0.7685 | |
222 | E | A | -0.7351 | |
223 | N | A | 0.0000 | |
224 | V | A | 0.0000 | |
225 | L | A | 0.0000 | |
226 | S | A | 0.0000 | |
227 | I | A | 0.0000 | |
228 | F | A | 0.4530 | |
229 | L | A | 0.0000 | |
230 | Y | A | 1.0403 | |
231 | S | A | 0.0893 | |
232 | N | A | -0.8872 | |
233 | S | A | -1.2811 | |
234 | D | A | -2.0408 |