| Chain sequence(s) |
A: MCMPCFTTDPNMAKKCRDCCGGNGKCFGPQCLCNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:15)
[INFO] Main: Simulation completed successfully. (00:00:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.2632 | |
| 2 | C | A | 0.1006 | |
| 3 | M | A | 0.4034 | |
| 4 | P | A | 0.5196 | |
| 5 | C | A | 0.0000 | |
| 6 | F | A | 1.5573 | |
| 7 | T | A | 0.5910 | |
| 8 | T | A | 0.0837 | |
| 9 | D | A | -0.8428 | |
| 10 | P | A | -1.0013 | |
| 11 | N | A | -1.6353 | |
| 12 | M | A | -1.1183 | |
| 13 | A | A | -1.6042 | |
| 14 | K | A | -3.4629 | |
| 15 | K | A | -2.4264 | |
| 16 | C | A | 0.0000 | |
| 17 | R | A | -4.1302 | |
| 18 | D | A | -3.5856 | |
| 19 | C | A | -1.6704 | |
| 20 | C | A | -2.0259 | |
| 21 | G | A | -2.0186 | |
| 22 | G | A | -2.8874 | |
| 23 | N | A | -3.3066 | |
| 24 | G | A | -2.5398 | |
| 25 | K | A | -1.1690 | |
| 26 | C | A | 0.6227 | |
| 27 | F | A | 1.8148 | |
| 28 | G | A | 0.4990 | |
| 29 | P | A | 0.2375 | |
| 30 | Q | A | 0.3125 | |
| 31 | C | A | 0.0000 | |
| 32 | L | A | 0.2494 | |
| 33 | C | A | -1.3600 | |
| 34 | N | A | -2.6988 | |
| 35 | R | A | -2.3843 |