Project name: query_structure

Status: done

Started: 2026-03-17 00:06:48
Settings
Chain sequence(s) A: MCMPCFTTDPNMAKKCRDCCGGNGKCFGPQCLCNR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:15)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:16)
Show buried residues

Minimal score value
-4.1302
Maximal score value
1.8148
Average score
-0.9604
Total score value
-33.6131

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.2632
2 C A 0.1006
3 M A 0.4034
4 P A 0.5196
5 C A 0.0000
6 F A 1.5573
7 T A 0.5910
8 T A 0.0837
9 D A -0.8428
10 P A -1.0013
11 N A -1.6353
12 M A -1.1183
13 A A -1.6042
14 K A -3.4629
15 K A -2.4264
16 C A 0.0000
17 R A -4.1302
18 D A -3.5856
19 C A -1.6704
20 C A -2.0259
21 G A -2.0186
22 G A -2.8874
23 N A -3.3066
24 G A -2.5398
25 K A -1.1690
26 C A 0.6227
27 F A 1.8148
28 G A 0.4990
29 P A 0.2375
30 Q A 0.3125
31 C A 0.0000
32 L A 0.2494
33 C A -1.3600
34 N A -2.6988
35 R A -2.3843
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Laboratory of Theory of Biopolymers 2018