Chain sequence(s) |
H: QVQLVQSGAEVKKPGASVKVSCKASGYTFKSYEMHWVRQAPGQGLEWMGRINPSVGSTWYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARGKREGGTEYLRKWGQGTLVTVSS
L: EIVLTQSPGTLSLSPGERATLSCRASQSVASSYLAWYQQKPGQAPRLLIYGASNRHTGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYHNAITFGGGTKVEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:44) [INFO] Main: Simulation completed successfully. (00:02:46) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.3750 | |
2 | V | H | -0.9210 | |
3 | Q | H | -1.2192 | |
4 | L | H | 0.0000 | |
5 | V | H | 0.2649 | |
6 | Q | H | 0.0000 | |
7 | S | H | -0.4147 | |
8 | G | H | -0.3844 | |
9 | A | H | 0.4498 | |
11 | E | H | 0.3397 | |
12 | V | H | 1.2401 | |
13 | K | H | -0.7927 | |
14 | K | H | -2.1401 | |
15 | P | H | -2.2821 | |
16 | G | H | -1.6366 | |
17 | A | H | -1.2583 | |
18 | S | H | -1.4373 | |
19 | V | H | 0.0000 | |
20 | K | H | -1.9879 | |
21 | V | H | 0.0000 | |
22 | S | H | -0.4997 | |
23 | C | H | 0.0000 | |
24 | K | H | -0.6955 | |
25 | A | H | 0.0000 | |
26 | S | H | -0.7272 | |
27 | G | H | -0.9253 | |
28 | Y | H | -0.4851 | |
29 | T | H | -0.4146 | |
30 | F | H | 0.0000 | |
35 | K | H | -1.1781 | |
36 | S | H | -1.0904 | |
37 | Y | H | -0.9455 | |
38 | E | H | -1.0574 | |
39 | M | H | 0.0000 | |
40 | H | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.4809 | |
45 | A | H | -0.8921 | |
46 | P | H | -0.9134 | |
47 | G | H | -1.2095 | |
48 | Q | H | -1.7281 | |
49 | G | H | -1.0807 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.7892 | |
52 | W | H | 0.0000 | |
53 | M | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | R | H | -0.0184 | |
56 | I | H | 0.0000 | |
57 | N | H | -0.1975 | |
58 | P | H | 0.0000 | |
59 | S | H | -0.0410 | |
62 | V | H | 1.2727 | |
63 | G | H | 0.1004 | |
64 | S | H | 0.3637 | |
65 | T | H | 0.5351 | |
66 | W | H | 0.8585 | |
67 | Y | H | -0.2504 | |
68 | A | H | 0.0000 | |
69 | Q | H | -2.5384 | |
70 | K | H | -2.7150 | |
71 | F | H | 0.0000 | |
72 | Q | H | -2.2472 | |
74 | G | H | -1.6206 | |
75 | R | H | -1.5073 | |
76 | V | H | 0.0000 | |
77 | T | H | -0.6302 | |
78 | M | H | 0.0000 | |
79 | T | H | -0.5455 | |
80 | R | H | -0.9581 | |
81 | D | H | -1.1593 | |
82 | T | H | -0.9108 | |
83 | S | H | -0.5660 | |
84 | T | H | -0.6217 | |
85 | S | H | -0.9198 | |
86 | T | H | 0.0000 | |
87 | V | H | 0.0000 | |
88 | Y | H | -0.5130 | |
89 | M | H | 0.0000 | |
90 | E | H | -1.4517 | |
91 | L | H | 0.0000 | |
92 | S | H | -1.2221 | |
93 | S | H | -1.2968 | |
94 | L | H | 0.0000 | |
95 | R | H | -3.1425 | |
96 | S | H | -2.3929 | |
97 | E | H | -2.6054 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.6875 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.5899 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | 0.0000 | |
107 | G | H | 0.0000 | |
108 | K | H | -1.6093 | |
109 | R | H | -2.2510 | |
110 | E | H | -2.2322 | |
111 | G | H | -1.5563 | |
112A | G | H | -1.3087 | |
112 | T | H | -1.2253 | |
113 | E | H | -1.1900 | |
114 | Y | H | 0.0000 | |
115 | L | H | 0.0000 | |
116 | R | H | -1.1540 | |
117 | K | H | -1.1230 | |
118 | W | H | 0.0000 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.2394 | |
121 | G | H | -0.3846 | |
122 | T | H | 0.0000 | |
123 | L | H | 1.0299 | |
124 | V | H | 0.0000 | |
125 | T | H | 0.0031 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.9406 | |
128 | S | H | -1.2445 | |
1 | E | L | -1.9149 | |
2 | I | L | 0.0000 | |
3 | V | L | 0.6625 | |
4 | L | L | 0.0000 | |
5 | T | L | -0.7139 | |
6 | Q | L | -0.8333 | |
7 | S | L | -0.9711 | |
8 | P | L | -0.6856 | |
9 | G | L | -0.9782 | |
10 | T | L | -0.8077 | |
11 | L | L | -0.2961 | |
12 | S | L | -0.2602 | |
13 | L | L | -0.3783 | |
14 | S | L | -0.7795 | |
15 | P | L | -1.1071 | |
16 | G | L | -1.6748 | |
17 | E | L | -2.2278 | |
18 | R | L | -2.8773 | |
19 | A | L | 0.0000 | |
20 | T | L | -0.6295 | |
21 | L | L | 0.0000 | |
22 | S | L | -0.9549 | |
23 | C | L | 0.0000 | |
24 | R | L | -2.3503 | |
25 | A | L | 0.0000 | |
26 | S | L | -1.0288 | |
27 | Q | L | -1.7198 | |
28 | S | L | -1.3437 | |
29 | V | L | 0.0000 | |
30 | A | L | -0.3490 | |
36 | S | L | -0.4186 | |
37 | S | L | -0.3537 | |
38 | Y | L | -0.2324 | |
39 | L | L | 0.0000 | |
40 | A | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | 0.0000 | |
44 | Q | L | 0.0000 | |
45 | K | L | -1.0735 | |
46 | P | L | -0.8883 | |
47 | G | L | -1.2854 | |
48 | Q | L | -1.7093 | |
49 | A | L | -1.1419 | |
50 | P | L | 0.0000 | |
51 | R | L | -0.9375 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | -0.5260 | |
56 | G | L | -0.4605 | |
57 | A | L | 0.0000 | |
65 | S | L | -1.0091 | |
66 | N | L | -1.4350 | |
67 | R | L | -1.7950 | |
68 | H | L | -1.2255 | |
69 | T | L | -0.7249 | |
70 | G | L | -0.9050 | |
71 | I | L | 0.0000 | |
72 | P | L | -1.3027 | |
74 | D | L | -2.3643 | |
75 | R | L | -1.9495 | |
76 | F | L | 0.0000 | |
77 | S | L | -1.0462 | |
78 | G | L | -0.6487 | |
79 | S | L | -0.7445 | |
80 | G | L | -1.0045 | |
83 | S | L | -0.9772 | |
84 | G | L | -1.1751 | |
85 | T | L | -1.7429 | |
86 | D | L | -2.0898 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.7637 | |
89 | L | L | 0.0000 | |
90 | T | L | -0.7967 | |
91 | I | L | 0.0000 | |
92 | S | L | -2.1765 | |
93 | R | L | -2.8657 | |
94 | L | L | 0.0000 | |
95 | E | L | -1.4974 | |
96 | P | L | -0.5586 | |
97 | E | L | -1.0312 | |
98 | D | L | 0.0000 | |
99 | F | L | -0.0307 | |
100 | A | L | 0.0000 | |
101 | V | L | -0.4360 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | Y | L | 0.0000 | |
108 | H | L | -1.1304 | |
114 | N | L | -1.7829 | |
115 | A | L | -1.0725 | |
116 | I | L | 0.0000 | |
117 | T | L | -0.2791 | |
118 | F | L | 0.0000 | |
119 | G | L | 0.0000 | |
120 | G | L | -0.6765 | |
121 | G | L | -0.8930 | |
122 | T | L | 0.0000 | |
123 | K | L | -1.1802 | |
124 | V | L | 0.0000 | |
125 | E | L | -0.0535 | |
126 | I | L | 0.8868 | |
127 | K | L | -0.8006 |