| Chain sequence(s) |
A: MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQLGKNEEGAPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:56)
[INFO] Main: Simulation completed successfully. (00:02:58)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.9544 | |
| 2 | D | A | 0.0767 | |
| 3 | V | A | 2.2242 | |
| 4 | F | A | 2.6121 | |
| 5 | M | A | 1.6809 | |
| 6 | K | A | -0.4259 | |
| 7 | G | A | -0.1331 | |
| 8 | L | A | 0.5990 | |
| 9 | S | A | -0.4909 | |
| 10 | K | A | -2.3088 | |
| 11 | A | A | -1.6084 | |
| 12 | K | A | -3.3281 | |
| 13 | E | A | -2.5145 | |
| 14 | G | A | -1.0604 | |
| 15 | V | A | 0.1877 | |
| 16 | V | A | 0.2703 | |
| 17 | A | A | -0.1416 | |
| 18 | A | A | -0.6009 | |
| 19 | A | A | -2.1003 | |
| 20 | E | A | -3.3016 | |
| 21 | K | A | -3.8373 | |
| 22 | T | A | -2.7123 | |
| 23 | K | A | -3.1653 | |
| 24 | Q | A | -2.0653 | |
| 25 | G | A | -0.7801 | |
| 26 | V | A | 0.5836 | |
| 27 | A | A | -0.6719 | |
| 28 | E | A | -1.7446 | |
| 29 | A | A | -1.0444 | |
| 30 | A | A | -0.6899 | |
| 31 | G | A | -1.1586 | |
| 32 | K | A | -2.1184 | |
| 33 | T | A | -0.9741 | |
| 34 | K | A | -2.0179 | |
| 35 | E | A | -1.0976 | |
| 36 | G | A | -0.3369 | |
| 37 | V | A | 0.8002 | |
| 38 | L | A | -0.0014 | |
| 39 | Y | A | 0.3216 | |
| 40 | V | A | -0.4231 | |
| 41 | G | A | -0.8055 | |
| 42 | S | A | -0.6480 | |
| 43 | K | A | -0.9453 | |
| 44 | T | A | -1.4646 | |
| 45 | K | A | -2.1279 | |
| 46 | E | A | -2.1796 | |
| 47 | G | A | -0.5896 | |
| 48 | V | A | 1.0591 | |
| 49 | V | A | 1.7583 | |
| 50 | H | A | 0.6024 | |
| 51 | G | A | 0.5709 | |
| 52 | V | A | 1.7520 | |
| 53 | A | A | 1.0874 | |
| 54 | T | A | 1.0283 | |
| 55 | V | A | 1.0518 | |
| 56 | A | A | -0.6744 | |
| 57 | E | A | -2.4254 | |
| 58 | K | A | -2.9951 | |
| 59 | T | A | -2.8270 | |
| 60 | K | A | -3.3173 | |
| 61 | E | A | -2.9786 | |
| 62 | Q | A | -1.7605 | |
| 63 | V | A | 0.2490 | |
| 64 | T | A | 0.2185 | |
| 65 | N | A | 0.1788 | |
| 66 | V | A | 1.4995 | |
| 67 | G | A | 1.2365 | |
| 68 | G | A | 0.9615 | |
| 69 | A | A | 0.9936 | |
| 70 | V | A | 1.6794 | |
| 71 | V | A | 1.4445 | |
| 72 | T | A | 1.1631 | |
| 73 | G | A | 1.7728 | |
| 74 | V | A | 2.1731 | |
| 75 | T | A | 1.1489 | |
| 76 | A | A | 0.9640 | |
| 77 | V | A | 1.3047 | |
| 78 | A | A | -0.2089 | |
| 79 | Q | A | -1.3531 | |
| 80 | K | A | -2.0311 | |
| 81 | T | A | -1.2973 | |
| 82 | V | A | -0.6629 | |
| 83 | E | A | -1.8922 | |
| 84 | G | A | -0.9492 | |
| 85 | A | A | -0.4622 | |
| 86 | G | A | -0.0581 | |
| 87 | S | A | 0.4843 | |
| 88 | I | A | 1.7661 | |
| 89 | A | A | 0.9045 | |
| 90 | A | A | 0.3191 | |
| 91 | A | A | 0.4411 | |
| 92 | T | A | 0.4187 | |
| 93 | G | A | 0.7554 | |
| 94 | F | A | 1.4019 | |
| 95 | V | A | 0.3339 | |
| 96 | K | A | -2.5814 | |
| 97 | K | A | -3.8415 | |
| 98 | D | A | -3.4155 | |
| 99 | Q | A | -2.6242 | |
| 100 | L | A | -2.8645 | |
| 101 | G | A | -3.2130 | |
| 102 | K | A | -4.0419 | |
| 103 | N | A | -4.3126 | |
| 104 | E | A | -4.9622 | |
| 105 | E | A | -3.4572 | |
| 106 | G | A | -1.9257 | |
| 107 | A | A | -1.4818 | |
| 108 | P | A | -2.1966 | |
| 109 | Q | A | -2.0053 | |
| 110 | E | A | -2.1031 | |
| 111 | G | A | -0.3132 | |
| 112 | I | A | 1.4024 | |
| 113 | L | A | 0.5938 | |
| 114 | E | A | -1.4097 | |
| 115 | D | A | -1.7068 | |
| 116 | M | A | -0.0144 | |
| 117 | P | A | 0.1373 | |
| 118 | V | A | 0.5309 | |
| 119 | D | A | -1.5627 | |
| 120 | P | A | -2.2910 | |
| 121 | D | A | -3.2114 | |
| 122 | N | A | -3.3211 | |
| 123 | E | A | -2.7561 | |
| 124 | A | A | -0.7328 | |
| 125 | Y | A | 0.1361 | |
| 126 | E | A | -0.7525 | |
| 127 | M | A | -0.1702 | |
| 128 | P | A | -1.1361 | |
| 129 | S | A | -1.7511 | |
| 130 | E | A | -2.6365 | |
| 131 | E | A | -2.6808 | |
| 132 | G | A | -1.8190 | |
| 133 | Y | A | -1.2496 | |
| 134 | Q | A | -2.3669 | |
| 135 | D | A | -1.8267 | |
| 136 | Y | A | -1.0133 | |
| 137 | E | A | -2.4471 | |
| 138 | P | A | -2.1850 | |
| 139 | E | A | -2.4711 | |
| 140 | A | A | -1.1537 |